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<channel>
	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/6052?offset=100</link>
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	<description><![CDATA[]]></description>
	
	
<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/38838/computer-scientistbioinformatician-at-ieo-in-milan-italy</guid>
  <pubDate>Thu, 31 Jan 2019 09:10:12 -0600</pubDate>
  <link></link>
  <title><![CDATA[Computer scientist/bioinformatician at IEO in Milan, Italy]]></title>
  <description><![CDATA[
<p>We are looking for a computer scientist or a bioinformatician with a strong computation background to join the bioinformatics unit of the IEO in Milan. Web development, scripting, experience with spring boot, hpc, docker are appreciated. The candidate will evolve in a research environment (next generation sequencing among others). The selected candidate will consolidate our team for the development and maintenance of the bioinformatics resources, and will have the opportunity to support the research groups in setting new tools and pipelines.</p>

<p>Place of employment and work</p>

<p>The candidate will be located at the Department of Experimental Oncology of the European Institute of Oncology in Milan (Italy), one of Europe’s leading research institutes in biomedical research, where he/she will also interact with one of the largest computational biology communities in Italy</p>

<p>Requirements:</p>

<p>The candidate should have a good knowledge of the UNIX system and good programming skills (bash, R, python, java). Background in bioinformatics would be appreciated but is not mandatory. Additional experience with containers (docker, singularity),  grid computing, web frameworks, continuous integrations will be appreciated.</p>

<p>For further info or to arrange an informal interview, please write to arnaud.ceol@ieo.it</p>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/4550/gupta-lab</guid>
  <pubDate>Sun, 15 Sep 2013 09:31:24 -0500</pubDate>
  <link></link>
  <title><![CDATA[Gupta Lab]]></title>
  <description><![CDATA[
<p>Gupta laboratory of Natural Information Processing at DA-IICT. Research in our lab currently focuses on two aspects of information processing viz. deciphering the information processing principles in life (systems biology) and making a computer out of bio-molecules. The key expertise of the lab is in error-correcting codes. We also work in classical and quantum information processing principles with expertise in coding theory and its wide variety of applications in Information and Communication Technology (ICT). </p>

<p>More @ http://www.guptalab.org/</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/file/view/13415/genomics-and-sequencing-approach-for-identification-of-biomarkers-to-assess-the-efficacy-of-tgf-%CE%B2ri-inhibitors-of-liver-cancer-in-vivo</guid>
	<pubDate>Tue, 05 Aug 2014 13:55:32 -0500</pubDate>
	<link>https://bioinformaticsonline.com/file/view/13415/genomics-and-sequencing-approach-for-identification-of-biomarkers-to-assess-the-efficacy-of-tgf-%CE%B2ri-inhibitors-of-liver-cancer-in-vivo</link>
	<title><![CDATA[Genomics and sequencing approach for identification of biomarkers to assess the efficacy of TGF-βRI inhibitors (of liver cancer) in vivo]]></title>
	<description><![CDATA[<p>Liver cancer is third leading cause of deaths and fourth most frequent occuring cancer worldwide. There are multiple signaling pathways responsible for causing cancer amongst which TGFb is most important cytokine whose signaling pathway promote cancer. However, main problem is to cure this cancer at late stage where we still have no treatment strategy to tackle this deadly cancer. &nbsp;Hence we need to find out new therapeutic target. One way is to look the relationships between mRNA, methylation and miRNA data of patients with different pathological conditions (cancer vs control either with inhibitor/not). MiRNA is small RNA molecules known to inhibit mRNA expression of particular gene by binding improperly to 3'UTR region of a gene and hence block binding of TF /translation of gene. CpG regions is known to located at promoter region of gene (5' UTR) and usually hypomethylated which allow to gene to transcribe and translate however sometime this region become hyper-methylated thats prevent expression of host gene. Thus , integration of these three data reveal new targets and pathways important for causing or preventing cancer and also reveal biomarker thats check the effects of inhibitor on signaling pathway underlying liver cancer.</p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
	<enclosure url="https://bioinformaticsonline.com/file/download/13415" length="26423" type="image/jpeg" />
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/38383/sidow-lab</guid>
  <pubDate>Fri, 07 Dec 2018 09:06:30 -0600</pubDate>
  <link></link>
  <title><![CDATA[Sidow Lab]]></title>
  <description><![CDATA[
<p>We study mechanisms of cancer evolution by using state-of-the-art genomic approaches at the bench and in analysis. Accurate genome reconstruction is our other major area of interest. We also collaborate on important questions for which our expertise in genomics and computation is relevant. Arend's biosketch highlights some of our past contributions.</p>

<p>http://www.sidowlab.org/</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/43001/gamper-lab</guid>
  <pubDate>Fri, 26 Mar 2021 07:45:02 -0500</pubDate>
  <link></link>
  <title><![CDATA[Gamper Lab]]></title>
  <description><![CDATA[
<p>Lab focuses on examining the mechanisms governing the signalling pathways from DNA damage sensing to the activation of stress-response genes. The long-term goal is to find proteins that are drug targets for cancer treatment (such as radiosensitizers for radiation therapy) or biomarkers that increase the predictive value of therapeutic outcome.</p>

<p>https://amgamper.weebly.com/</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/4143/bioinformatics-career-overview</guid>
	<pubDate>Sun, 01 Sep 2013 18:25:46 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/4143/bioinformatics-career-overview</link>
	<title><![CDATA[Bioinformatics Career Overview]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/aElvQsD3qvg" frameborder="0" allowfullscreen></iframe>A brief overview of Bioinformatics career opportunities brought to you by the University of South Dakota Computer Science Department]]></description>
	
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	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/33617/list-of-universities-offering-bachelor-or-master-bioinformatics-degree-in-pakistan</guid>
	<pubDate>Wed, 21 Jun 2017 04:20:43 -0500</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/33617/list-of-universities-offering-bachelor-or-master-bioinformatics-degree-in-pakistan</link>
	<title><![CDATA[List of universities offering Bachelor or Master bioinformatics degree in Pakistan]]></title>
	<description><![CDATA[<p>There are a lot of universities offering Bachelor or Master degree in Pakistan. Following are the list of few intitute/universities</p><p>Bachelor/ BS Bioinformatics at<br />1. Al-khair University, Bhimber<br />2. Government College University, Faisalabad<br />3. University Of Agriculture, Faisalabad<br />4. Comsats Institute Of Information Technology [isb], Islamabad<br />5. International Islamic University, Islamabad<br />6. Quaid-e-azam University, Islamabad<br />7. Khushal Khan Khattak University, Karak<br />8. Virtual University Of Pakistan, Lahore<br />9. Virtual University Of Pakistan, Lahore<br />10. Hazara University, Mansehra<br />11. Shaheed Benazir Bhutto Women University, Peshawar<br />12. Comsats Institute Of Information Technology, Sahiwal<br />13. Capital University Of Science And Technology, Islamabad<br />14. Foundation University, Islamabad<br />15. Baqai Medical University/hospital, Karachi<br />16. Institute Of Business And Technology(main Campus), Karachi<br />17. Sir Syed University Of Engineering &amp; Technology, Karachi<br />18. Forman Christian College, Lahore<br />19. Qarshi University (lhr), Lahore<br />20. The Superior University, Lahore<br />21. University Of Management And Technology, Lahore<br />22. Federal Institute Of Health Sciences, Lahore<br />23. Shaheed Benazir Bhutto Women University Peshawar, Sub Campus, Swabi<br />24. Government Postgraduate College ( Mandian), Abbottabad<br />25. Federal Institute Of Health Sciences, Multan<br />26. Fedral Institute Of Health Sciences, Muzaffarabad<br />27. The Limit Institution Of Health Sciences, Sahiwal</p><p><br />Master/ MS Bioinformatics cources at<br />1. Government College University, Faisalabad<br />2. Comsats Institute Of Information Technology [isb], Islamabad<br />3. International Islamic University, Islamabad<br />4. National University Of Science &amp; Technology, Islamabad<br />5. Quaid-e-azam University, Islamabad<br />6. University Of Sindh, Jamshoro<br />7. Virtual University Of Pakistan, Lahore<br />8. Hazara University, Mansehra<br />9. Shaheed Benazir Bhutto Women University, Peshawar<br />10. Capital University Of Science And Technology, Islamabad<br />11. Cecos University Of Information Tech. &amp; Emerging Sciences, Peshawar</p><p>The real bioinformatics scope lies if there are research labs which work in this field. One has to take account of that. If so then try to get information of those labs and visit them to get a hang of the work they pursue.</p><p>There is a huge buzz of precision medicine in light of genomics all around the world. One should also try to see how genomics infrastructure is built up or standing in Pakistan. If research labs having collaboration with hospitals employ genomics then one must also visit such labs. This will bring new avenues in healthcare advances. Not only it opens up the wealth of knowledge one can make out of genomics study but will also advance the critical thinking of therapies.</p><p>So I would encourage to target research labs working in the fields and also get information of hospitals employing genomics, this will give you an overall understanding of the fields demand in your country.</p>]]></description>
	<dc:creator>Reshma Khatun</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/879/bioprogramming</guid>
	<pubDate>Sun, 14 Jul 2013 16:29:53 -0500</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/879/bioprogramming</link>
	<title><![CDATA[BioProgramming]]></title>
	<description><![CDATA[<p>The completion of the first human genome drafts was just a start of the modern DNA sequencing era which resulted in further invention, improved development toward new advanced strategies of high-throughput DNA sequencing, so called the &ldquo;high-throughput next generation sequencing&rdquo; (HT-NGS). The decreasing genome sequencing cost and desire to explore and understand biological machanism at genomic level, speed up the genomic sequencing projects. In the fast growing HT-NGS technologies, the main challenge is to cope with the analysis of vast production of sequencing database through advanced bioinformatics tools. In oder to develope sotware/tools bioinformatician/ biological programmers need to expertise in any one one the programming language. However, sometime one language are not enough to handle all sort of biological needs, which compel us to learn new biologically suitable language to handle ever growing genome or protein sequences.</p><p>The next step after reading genetic code is writing a script to analyse and explore the hidden information. This tutorial is aimed to introduce you new biological programming languages with their packages/libraries, and assist in your scripting work.</p><p>Navigate the sub-section of this page [ see right hand side of the page for it ]</p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/1215/livestock-functional-genomics-summer-school-lfg-2013</guid>
  <pubDate>Fri, 02 Aug 2013 09:57:37 -0500</pubDate>
  <link></link>
  <title><![CDATA[Livestock Functional Genomics Summer School (LFG 2013)]]></title>
  <description><![CDATA[
<p>*Livestock Functional Genomics Summer School - Call for applications*</p>

<p>1st Livestock Functional Genomics Summer School (LFG 2013).</p>

<p>This School was designed for graduate students and early-stage researchers with interest in livestock genomics, who are engaged in projects that require knowledge in the field of computational biology.</p>

<p>Sixty selected participants will spend 13 days receiving theoretical and practical training in genomic data handling from internationally renowned experts.</p>

<p>After the course, the participant should understand the basis and the context of livestock big molecular data, and be able to manipulate high density genotypes, whole genome sequences and transcriptome data.</p>

<p>The Summer School will be held in Araçatuba-SP Brazil, from the 13th to the 21st of September 2013.</p>

<p>All accepted participants will have *expenses fully covered (air ticket, hotel and meals)*, including a free pass to the 5th International Symposium on Animal Functional Genomics http://www.isafg2013.org.br </p>

<p>Applicants will be selected based on their résumés. Application date is due by August 10th.  Results will be announced in August 12th.  </p>

<p>Please consult website: http://www.sciencesatellite.org.br/sschool</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/1514/list-of-pharmacogenomics-companies-worldwide</guid>
	<pubDate>Fri, 09 Aug 2013 13:24:47 -0500</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/1514/list-of-pharmacogenomics-companies-worldwide</link>
	<title><![CDATA[List of pharmacogenomics companies worldwide]]></title>
	<description><![CDATA[<div><div><p>Pharmacogenomics are the most promising area of research. Here is the list of some Pharmacogenomics companies worldwide. Feel free to add more pharmacogenomics companies if not mentioned in here.</p><p>Great Pharmacogenomics companies <br /><a href="http://www.aruplab.com/">www.aruplab.com</a> <br /><a href="http://www.clarientinc.com/">www.clarientinc.com</a> <br /><a href="http://www.cns-hts.com/">www.cns-hts.com</a> <br /><a href="http://www.dnanow.com/">www.dnanow.com</a> <br /><a href="http://www.dnavision.be/">www.dnavision.be</a> <br /><a href="http://www.dnavision.com/">www.dnavision.com</a> <br /><a href="http://www.dxsdiagnostics.com/">www.dxsdiagnostics.com</a> <br /><a href="http://www.entrogen.com/">www.entrogen.com</a> <br /><a href="http://www.exiqon.com/">www.exiqon.com</a> <br /><a href="http://www.gene.com/">www.gene.com</a> <br /><a href="http://www.genomichealth.com/">www.genomichealth.com</a> <br /><a href="http://www.genoptix.com/">www.genoptix.com</a> <br /><a href="http://www.genpathdiagnostics.com/">www.genpathdiagnostics.com</a> <br /><a href="http://www.gentris.com/">www.gentris.com</a> <br /><a href="http://www.immunicon.com/">www.immunicon.com</a> <br /><a href="http://www.ingenuity.com/">www.ingenuity.com</a> <br /><a href="http://www.lab21.com/">www.lab21.com</a> <br /><a href="http://www.labcorp.com/">www.labcorp.com</a> <br /><a href="http://www.lion-ag.de/">www.lion-ag.de</a> <br /><a href="http://www.lynxgen.com/">www.lynxgen.com</a> <br /><a href="http://www.mayoclinic.com/">www.mayoclinic.com</a> <br /><a href="http://www.mesoscale.com/">www.mesoscale.com</a> <br /><a href="http://www.microcide.com/">www.microcide.com</a> <br /><a href="http://www.mitokor.com/">www.mitokor.com </a> <br /><a href="http://www.monarchlifesciences.com/">www.monarchlifesciences.com</a> <br /><a href="http://www.mplnet.com/">www.mplnet.com</a> <br /><a href="http://www.orchidbio.com/">www.orchidbio.com</a> <br /><a href="http://www.pebio.com/">www.pebio.com</a> <br /><a href="http://www.phenomenome.com/">www.phenomenome.com</a> <br /><a href="http://www.phenopath.com/">www.phenopath.com</a> <br /><a href="http://www.ppgx.com/">www.ppgx.com</a> <br /><a href="http://www.prometheuslabs.com/">www.prometheuslabs.com</a> <br /><a href="http://www.protogene.com/">www.protogene.com</a> <br /><a href="http://www.questdiagnostics.com/">www.questdiagnostics.com</a> <br /><a href="http://www.rigelinc.com/">www.rigelinc.com</a> <br /><a href="http://www.rii.com/">www.rii.com</a> <br /><a href="http://www.saladax.com/">www.saladax.com</a> <br /><a href="http://www.tmdlab.com/">www.tmdlab.com</a> <br /><a href="http://www.transgenomic.com/">www.transgenomic.com</a> <br /><a href="http://www.twt.com/">www.twt.com</a> <br /><a href="http://www.uslabs.net/">www.uslabs.net</a> <br /><a href="http://www.variagenics.com/">www.variagenics.com</a> <br /><br />Great Equipment Companies for Genomics <br /><a href="http://www.affymetrix.com/">www.affymetrix.com</a> <br /><a href="http://www.illumina.com/">www.illumina.com</a> <br /><a href="http://www.iontorrent.com/">www.iontorrent.com</a> <br /><a href="http://www.sequenom.com/">www.sequenom.com</a> <br /><a href="http://www.appliedbiosystems.com/">www.appliedbiosystems.com</a> <br /><a href="http://www.454.com/">www.454.com</a> <br /><a href="http://www.appliedbiosystems.com/">www.appliedbiosystems.com</a><br /><br />Genomics in India <br /><a href="http://www.ganitlabs.in/">www.ganitlabs.in</a> <br /><a href="http://www.sandor.co.in/">www.sandor.co.in</a> <br /><a href="http://www.igib.res.in/">www.igib.res.in</a> <br /><a href="http://www.genotypic.co.in/">www.genotypic.co.in</a> <br /><a href="http://www.ocimumbio.com/">www.ocimumbio.com</a> <br /><a href="http://www.abcgenomics.com/">www.abcgenomics.com</a> <br /><a href="http://www.xcelrisgenomics.com/">www.xcelrisgenomics.com</a> <br /><a href="http://www.ayugen.com/">www.ayugen.com</a> <br /><a href="http://www.geneombiotech.com/">www.geneombiotech.com</a> <br /><br /> Large Global Whole Genome Companies <br /><a href="http://www.decode.com/">www.decode.com</a> <br /><a href="http://www.23andme.com/">www.23andme.com</a> <br /><a href="http://www.navigenics.com/">www.navigenics.com</a><br />www.pathway.com<br /><br /> Global companies offering genomics services <br /><a href="http://www.asuragen.com/">www.asuragen.com</a> <br /><a href="http://www.baseclear.com/">www.baseclear.com</a> <br /><a href="http://www.agtcenter.com/">www.agtcenter.com</a> <br /><a href="http://www.ambrygen.com/">www.ambrygen.com</a> <br /><a href="http://www.arosab.com/">www.arosab.com</a> <br /><a href="http://www.agrf.org.au/">www.agrf.org.au</a> <br /><a href="http://www.beckmangenomics.com/">www.beckmangenomics.com</a> <br /><a href="http://www.genomics.cn/">www.genomics.cn</a> <br /><a href="http://www.bsf.a-star.edu.sg/">www.bsf.a-star.edu.sg</a> <br /><a href="http://www.cbm.fvg.it/">www.cbm.fvg.it</a> <br /><a href="http://www.cincinnatichildrens.org/">www.cincinnatichildrens.org</a> <br /><a href="http://www.cofactorgenomics.com/">www.cofactorgenomics.com</a> <br /><a href="http://www.covance.com/">www.covance.com</a> <br /><a href="http://www.dnalandmarks.ca/">www.dnalandmarks.ca</a> <br /><a href="http://www.dnavision.com/">www.dnavision.com</a> <br /><a href="http://www.expressionanalysis.com/">www.expressionanalysis.com</a> <br /><a href="http://www.fasteris.com/">www.fasteris.com</a> <br /><a href="http://www.gatc-biotech.com/">www.gatc-biotech.com</a> <br /><a href="http://www.genesdiffusion.com/">www.genesdiffusion.com</a> <br /><a href="http://www.geneseek.com/">www.geneseek.com</a> <br /><a href="http://www.geneticvisions.com/">www.geneticvisions.com</a> <br /><a href="http://www.geneworks.com.au/">www.geneworks.com.au</a> <br /><a href="http://www.genizon.com/">www.genizon.com</a> <br /><a href="http://www.genoskan.dk/uk">www.genoskan.dk/uk</a> <br /><a href="http://www.gpbio.jp/">www.gpbio.jp</a> <br /><a href="http://www.igatechnology.com/">www.igatechnology.com</a> <br /><a href="http://www.igenixinc.com/">www.igenixinc.com</a> <br /><a href="http://www.auxologico.it/">www.auxologico.it</a> <br /><a href="http://www.lifeandbrain.com/">www.lifeandbrain.com</a> <br /><a href="http://www.macrogen.co.kr/eng">www.macrogen.co.kr/eng</a> <br /><a href="http://www.gqinnovationcenter.com/">www.gqinnovationcenter.com</a> <br /><a href="http://www.mftservices.de/">www.mftservices.de</a> <br /><a href="http://www.ncgr.org/">www.ncgr.org</a> <br /><a href="http://www.ramaciotti.unsw.edu.au/">www.ramaciotti.unsw.edu.au</a> <br /><a href="http://www.rikengenesis.jp/">www.rikengenesis.jp</a> <br /><a href="http://www.sabiosciences.com/">www.SABiosciences.com</a> <br /><a href="http://www.sequensysbio.com/">www.sequensysbio.com</a> <br /><a href="http://www.servicexs.com/">www.servicexs.com</a> <br /><a href="http://www.snp-genetics.com/">www.snp-genetics.com</a> <br /><a href="http://www.takara-bio.com/">www.takara-bio.com</a> <br /><a href="http://www.gen-probe.com/">www.gen-probe.com</a> <br /><a href="http://www.traitgenetics.com/">www.traitgenetics.com</a></p></div></div>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
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