BOL: Related items

Rosalind Bioinformatics problems !!!

Abhi — Thu, 18 Dec 2014 10:32:48 -0600

Rosalind is a platform for learning bioinformatics and programming through problem solving. Take a tour to get the hang of how Rosalind works.

http://rosalind.info/problems/list-view/

Address of the bookmark: http://rosalind.info/problems/list-view/

RA Bioinformatics at Jamia Hamdard

Sat, 28 Nov 2015 03:37:36 -0600

Research Associate, Bioinformatics Facility
Jamia Hamdard - New Delhi, Delhi
Research Associate, Bioinformatics Facility, Jamia Hamdard.
Emoluments: Rs. 22,000 + HRA 30%
Qualification: PhD or equivalent or having 3 years of research, teaching and design and development experience after M. Pharm./M.VSc./M.E./M.Tech. PhD in life sciences and related areas with experience in Bioinformatics may apply. Company Info.
Jamia Hamdard

Jamia Hamdard New Delhi - 110062 Additional Information States & U.T State & Union Territories Delhi How To Apply Apply Details
Last date of application: December 5, 2015 Web/Notification URL http://www.jamiahamdard.ac.in/

UAS Dharwad Assistant Professor

Fri, 04 Dec 2015 21:06:23 -0600

UNIVERSITY OF AGRICULTURAL SCIENCES, DHARWAD

Applications are invited in the prescribed form for filling up the following posts of Teachers and Service Personnel from the candidates who are qualified as on the last date fixed for receipt of applications in the University of Agricultural Sciences, Dharwad.

I. ASSISTANT PROFESSOR CADRE (Scale of pay Rs.15600-39100 + AGP Rs. 6000) (UGC / ICAR pay-scales)

I. Re-notified posts:

9. Assistant Professor of Bioinformatics 1 GM-1

More Info : https://sites.google.com/a/uasd.in/recruitment/

BioinfoLab

Fri, 25 Mar 2016 11:05:35 -0500

Laboratory of Statistics and Computational tools for Bioinformatics

The Laboratory of Statistics and Computational tools for Bioinformatics (BioinfoLab) is hosted at the Istituto per le Applicazioni del Calcolo "Mauro Picone" - CNR . The laboratory has been officially opened in 2012 with the support of Programma Operativo Nazionale "Ricerca e Competitività" 2007-2013 (PON "R&C"), and it incorporates several expertise and research activities started since 2007, and supported by several CNR projects. Main interest of BioinfoLab is to develop novel statistical methods and computational tools for the analysis of high dimensional data arising from "Multi-omics" applications. In particular, current activities involve the analysis of ChIP-seq and RNA-seq experiments.

More at http://bioinfo.na.iac.cnr.it/BioinfoLab/index.html

MAKER

Jitendra Narayan — Sun, 07 Feb 2016 15:59:24 -0600

MAKER is a portable and easily configurable genome annotation pipeline.Its purpose is to allow smaller eukaryotic and prokaryotic genome projects to independently annotate their genomes and to create genome databases. MAKER identifies repeats, aligns ESTs and proteins to a genome, produces ab-initio gene predictions and automatically synthesizes these data into gene annotations having evidence-based quality values.

More at http://www.yandell-lab.org/software/maker.html

Address of the bookmark: http://www.yandell-lab.org/software/maker.html

liftover

Jitendra Narayan — Mon, 08 Feb 2016 15:45:03 -0600

Convenient conversions between genome assemblie. The liftover package makes it easy to remap genomic coordinates to a different genome assembly.

More at https://github.com/aaronwolen/liftover

https://www.bioconductor.org/help/workflows/liftOver/

Address of the bookmark: https://github.com/aaronwolen/liftover

Stacks

Jitendra Narayan — Wed, 24 Feb 2016 15:52:30 -0600

Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.

More at http://catchenlab.life.illinois.edu/stacks/

Address of the bookmark: http://catchenlab.life.illinois.edu/stacks/

scikit-learn

Jitendra Prajapati — Mon, 29 Feb 2016 17:39:24 -0600

Machine Learning in Python

Simple and efficient tools for data mining and data analysis
Accessible to everybody, and reusable in various contexts
Built on NumPy, SciPy, and matplotlib
Open source, commercially usable - BSD license

More at http://scikit-learn.org/stable/index.html

Address of the bookmark: http://scikit-learn.org/stable/auto_examples/index.html

PhyloGrapher - Graph Visualization Tool

Jitendra Prajapati — Wed, 06 Apr 2016 19:06:48 -0500

PhyloGrapher is a program designed to visualize and study evolutionary relationships within families of homologous genes or proteins (elements).PhyloGrapher is a drawing tool that generates custom graphs for a given set of elements. In general, it is possible to use PhyloGrapher to visualize any type of relations between elements.

More at http://www.atgc.org/PhyloGrapher/PhyloGrapher_Welcome.html

Address of the bookmark: http://www.atgc.org/PhyloGrapher/PhyloGrapher_Welcome.html

Professor (all levels) in Bioinformatics and Computational Biology

Tue, 22 Nov 2016 05:43:38 -0600

King Abdullah University of Science and Technology (KAUST) (kaust.edu.sa) is seeking a highly motivated and skilled faculty member for the Bioinformatics track whose research focuses on development of methods and tools for Bioinformatics and Computational Biology.
KAUST is an international, graduate-level research university dedicated to advancing science and technology through interdisciplinary research, education, and innovation. Located on the shores of the Red Sea in Saudi Arabia, KAUST offers superb research facilities, generous assured research funding, and internationally competitive salaries, attracting top international faculty, scientists, engineers, and students to conduct fundamental and goal-oriented research to address the world’s pressing scientific and technological challenges in the areas of food, water, energy, and the environment.
The successful applicant is expected to develop world-leading research in domain of bioinformatics/computational biology with focus on development of novel computational approaches for efficient and accurate methods of analyzing biological phenomena at molecular level. The faculty member will be part of the Computational Bioscience Research Center (CBRC) within the Computer, Electrical and Mathematical Sciences and Engineering (CEMSE) Division. The position will remain open until filled.

Requirements:

PhD or equivalent in a Computer Science, Mathematics or Engineering discipline. Candidates should be well-established within the research field relevant to the position grade. They should demonstrate original research and experience at the highest international level.

Responsibilities and tasks:

Research competence in the following areas is preferred:
Analysis of next generation sequencing (NGS) and other ‘omics’ data (e.g. CAGE, ChIP-Seq, DHS, RNA-Seq, Ribo-Seq, proteomic, metabolic and NMR spectra, etc.).
Signaling, regulatory and metabolic pathways analysis.
Development of tools (web-based and standalone) suited for efficient computational biology/bioinformatics.

Visit cemse.kaust.edu.sa to apply.