How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several per...em, you can use "yum" for the rescue. Dont worry biological data cruncher, this is true w...for DNA sequencinglibbiojava-java - Java API to biological...4095 days ago
Five unique traits of effective computational biologist
...and tools to analyse gigantic biological data. Being a great biological programmer or bioinformaticia...lex than that of your limited programming rules. 4. Do not search, res...be passionate about more than programming — you must also be exci...4096 days ago
Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.4095 days ago
Online Courses for biology beginners
Most of the time we face some biological problems while analysing our data computationally. This bookmark is being created to provide list of all free online courses at one place. If you know any other good online cource resources to learn biology please let me know.4089 days ago
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Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helical...an architecture that corresponds closely to the biological systems. The model is enriche...embrane part. The closed association between the biological...4090 days ago
Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways ...ul tools and was easy to use, whereas SPSS is for non-programmers and R need programming skills. I am wondering what o...4097 days ago
Does anyone have Nanopore latest updates?
There was a lot of buzz about Oxford Nanopore Technologies® is developing the GridION™ system and mini...oteins. With a broad patent portfolio, the Oxford Nanopore pipeline includes biological...3958 days ago
Bio++ : C Language libraries for your biological need
...importantly, it supports object-oriented programming in a familiar setting and fr...ally interested in C/C++ language for the biological programming? If yes there is good news fo...io++. J Now the time has been change, the biological programmers are ready to use t...4093 days ago
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Bioinformatics: Introduction to PERL
This course is aimed at those new to programming and provides an introduction to programming using Perl. By the end of this course, attendees should be able to write simple Perl programs and to understand more c...4096 days ago
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Perl Poem: Parse it in both Perl and English!
Larry's, er, corpus has fortunately been overshadowed by that of the reigning Perl Poet...cal Conference, entitled "Camels and Needles: Computer Poetry Meets the Perl Programming Language". (The paper is avai...4064 days ago
Golden Rules of Bioinformatics
...uss it. :P Stastics is a systematic method of comming to the wrong conclusion with confidence. Bug is a undocumented feature in programming languages. Good biological programmer goes on summer holi...4061 days ago
Computational Biology in the 21st Century: Making Sense out of Massive Data
Computational Biology in the 21st Century: Making Sense out of Massive Data Air date: Wednesday, February 0...ctures, can be used to attack challenges in sequencing, medical genomics and biological...4047 days ago
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Needleman-Wunsch Algorithm in Perl
#!/usr/bin/perl # USAGE: perl nw.pl HEAGAWGHEE PAWHEAE BLOSUM50.txt -8 # See: "Biological sequence anaysis" Durbin et al. ed. CUP 1998, Pg. 19 # Needleman-Wunsch global alignment algo (GOT...3051 days ago
Implementation of biological random mutation with Perl
#!/usr/bin/perl -w use strict; use warnings; #sequence for a better recognition my $DNA="AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA \ n";...3047 days ago
Which of the following programming language is best for a bioinformatics beginner?
I will be doing NGS in the course of my research work and I will like to learn a programming language which is compatible...3676 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3672 days ago
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of...atics is the center of modern biological research and if a researcher wants to discover new biological insights by evaluating the gl...ormatician must have a strong biological background in his/her researc...2507 days ago
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Tags: BioJava, Java, Biological Programming
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Comment on "Which are the best statistical programming languages to study for a bioinformatician?"
The recent article on Nature explain it better ... R becoming the most popular language amongst biological researchers http://www.nature.com/news/programming-tools-adventures-with-r-1.16609?3553 days ago
Comment on "Which of the following programming language is best for a bioinformatics beginner?"
...operl.org/wiki/Main_Page), one of the first biological module repositories that incr...to do phylogenetic analysis. There are some biological software that uses Perl such...ng like the manual) or very complex (object programming using Moose). Some Bioperl mo...3676 days ago