Comment on "Tools to detect synteny blocks regions among multiple genomes"
Genome synteny analysis is the comparison of the genomic structure and gene content...gical interest. Obtain the genome sequences: Download the gen...thologous genes between the genomes using tools such as OrthoF...ng them to other sources of genomic data, such as gene express...569 days ago
Comment on "Basic command-line to run BLAST"
...against many different databases, including the NCBI GenBank, RefSeq, and non-redundant databases. Choose...es and can be used for many different types of analyses, including gene annotation, functional annotation,...569 days ago
Comment on "CovCal: Coverage / Read Count Calculator"
...d as the average number of reads that covers each base of the reference genome. Estimating the sequen...C = LN / G C is the sequencing coverage G is the length of the genome L is the read length N is...728 days ago
Comment on "Elgg Installation steps !"
Useful for debugging https://stackoverflow.com/questions/43094726/your-password-does-not-satisfy-the-current-policy-requirements https://elgg.org/discussion/view/1945994/elgg-requires-the-php-extension-gd752 days ago
781 days ago
Comment on "Fix rewritable error of ELGG !"
sudo systemctl restart apache2 Now, create an .htaccess file in the web root. sudo nano /var/www/html/.htaccess...857 days ago
Comment on "Kraken: ultrafast metagenomic sequence classification using exact alignments"
Useful links https://genomics.sschmeier.com/ngs-taxonomic-investigation/index.html935 days ago
Comment on "Run miniasm assembler on nanopore reads !"
minimap2 –x ava-ont \ ../../trimming_practical/nanofilt/nanofilt_trimmed.fastq \ ../../trimming_practical/nanofilt/nanofilt_trimmed.fastq \ | gzip -...942 days ago
Comment on "CrossMap: program for genome coordinates conversion between different assemblies"
https://www.researchgate.net/publication/357925950_FastRemap_A_Tool_for_Quickly_Remapping_Reads_between_Genome_Assemblies976 days ago
Comment on "Run multiple bash command in screen !"
srun --partition=compute --nodes=1 --ntasks-per-node=40 --pty bash982 days ago