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	<title><![CDATA[BOL: Results for "https://www.galaxus.ch/en/sector/showdiscussion/cvv-dumps-visit-amsigacom-d4zshp53-221529"]]></title>
	<link>https://bioinformaticsonline.com/search?q=+https%3A%2F%2Fwww.galaxus.ch%2Fen%2Fsector%2Fshowdiscussion%2Fcvv-dumps-visit-amsigacom-d4zshp53-221529</link>
	<atom:link href="https://bioinformaticsonline.com/search?q=+https%3A%2F%2Fwww.galaxus.ch%2Fen%2Fsector%2Fshowdiscussion%2Fcvv-dumps-visit-amsigacom-d4zshp53-221529" rel="self" type="application/rss+xml" />
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<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/blog/view/1295/five-points-for-bioinformatics-softwaretools</guid>
	<pubDate>Mon, 05 Aug 2013 04:12:32 -0500</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/1295/five-points-for-bioinformatics-softwaretools</link>
	<title><![CDATA[Five points for bioinformatics software/tools]]></title>
	<description><![CDATA[In the bioinformatics sector we mostly spend time on computational analysis of huge amounts of data and try to make sense of it, biologically. But, most of the newbie bioinformaticians are faced with dilemma w...]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/blog/view/1212/computational-proteomics-lets-remember-the-basics</guid>
	<pubDate>Thu, 01 Aug 2013 17:24:20 -0500</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/1212/computational-proteomics-lets-remember-the-basics</link>
	<title><![CDATA[Computational Proteomics : Lets remember the basics]]></title>
	<description><![CDATA[I spend some of my valuable time in computational drug designing sector. I remember my initial proteomics days, playing with interactive protein visualization software and dreaming big. Fortunately or unfortun...]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/bookmarks/view/42963/davi-deep-learning-based-tool-for-alignment-and-single-nucleotide-variant-identification</guid>
	<pubDate>Tue, 16 Mar 2021 05:41:33 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/42963/davi-deep-learning-based-tool-for-alignment-and-single-nucleotide-variant-identification</link>
	<title><![CDATA[DAVI: Deep learning-based tool for alignment and single nucleotide variant identification]]></title>
	<description><![CDATA[DAVI consists of models for both global and local alignment and for variant calling. We have evaluated the performance of DAVI against existing state-of-the-art tool sets and found that its accuracy and perfor...]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/bookmarks/view/2376/citrus-perl</guid>
	<pubDate>Wed, 14 Aug 2013 14:57:44 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/2376/citrus-perl</link>
	<title><![CDATA[Citrus Perl]]></title>
	<description><![CDATA[Citrus Perl is a binary distribution of Perl created for GUI application developers. The distribution includes wxPerl, the Perl wrapper for wxWidgets. Where supported by the operating system wxWidgets is available as a package for the 2.8.x stable branch and the 2.9.x development branch.]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/file/view/29110/structural-variants-ppt</guid>
	<pubDate>Wed, 07 Sep 2016 03:16:09 -0500</pubDate>
	<link>https://bioinformaticsonline.com/file/view/29110/structural-variants-ppt</link>
	<title><![CDATA[Structural variants PPT]]></title>
	<description><![CDATA[1000 Genomes data tutorial at ASHG
Structural variants presentation by
Jan Korbel
European Molecular Biology Laboratory (EMBL) Heidelberg Genome Biology Research Unit
Reference:&nbsp;
https://www.genome.gov/pages/research/der/1000genomesprojecttutorials/structuralvariants-jankorbel.pdf]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/file/view/29638/r-graphical-cookbook-by-winston-chang</guid>
	<pubDate>Fri, 04 Nov 2016 12:50:30 -0500</pubDate>
	<link>https://bioinformaticsonline.com/file/view/29638/r-graphical-cookbook-by-winston-chang</link>
	<title><![CDATA[R Graphical Cookbook by Winston Chang]]></title>
	<description><![CDATA[R Graphical Cookbook by Winston Chang
A very nice book by Winston Chang for R ethusiast. The R code presented in these pages is the R code actually used to produce the Figures in the book. There will be diffe...]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/pages/view/880/bio-c-language-libraries-for-your-biological-need</guid>
	<pubDate>Sun, 14 Jul 2013 16:30:55 -0500</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/880/bio-c-language-libraries-for-your-biological-need</link>
	<title><![CDATA[Bio++ : C Language libraries for your biological need]]></title>
	<description><![CDATA[C has always been a language that never attempts to tie a programmer down - it allows for easy implementation, it comes with a genuinely useful standard library that can itself be implemented in C, and it is b...]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/pages/view/898/ruby-language</guid>
	<pubDate>Mon, 15 Jul 2013 01:34:26 -0500</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/898/ruby-language</link>
	<title><![CDATA[Ruby Language]]></title>
	<description><![CDATA[Ruby was created by Yukihiro Matsumoto, who wished to create a new language that balanced functional programming with imperative programming
Ruby is a dynamic, reflective, general purpose object-oriented prog...]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/pages/view/918/data-mining-in-bioinformatics</guid>
	<pubDate>Tue, 16 Jul 2013 03:21:28 -0500</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/918/data-mining-in-bioinformatics</link>
	<title><![CDATA[Data Mining in Bioinformatics]]></title>
	<description><![CDATA[Data mining, the extraction of hidden predictive information from large databases. Data mining is becoming an increasingly important tool to transform this data into information. It is commonly used in a wide...]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/pages/view/920/bioinformatics-algorithms</guid>
	<pubDate>Tue, 16 Jul 2013 03:35:15 -0500</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/920/bioinformatics-algorithms</link>
	<title><![CDATA[Bioinformatics Algorithms]]></title>
	<description><![CDATA[An algorithm is a computable set of steps to achieve a desired result.
We use algorithms every day. For example, a recipe for baking a cake is an algorithm. Most programs, with the exception of some artificia...]]></description>
</item>

<item>
	<guid isPermaLink='false'>983</guid>
	<pubDate>Wed, 17 Jul 2013 15:33:39 -0500</pubDate>
	<link>https://bioinformaticsonline.com/thewire/view/983</link>
	<title><![CDATA[Wire post by Rahul Agarwal]]></title>
	<description><![CDATA[Single cell sequencing:http://www.wired.com/wiredscience/2013/07/bringing-microbial-dark-matter-into-the-light/ #Omics]]></description>
</item>

<item>
	<guid isPermaLink='false'>1172</guid>
	<pubDate>Mon, 22 Jul 2013 04:48:24 -0500</pubDate>
	<link>https://bioinformaticsonline.com/thewire/view/1172</link>
	<title><![CDATA[Wire post by Jit]]></title>
	<description><![CDATA[Bacteria cause cancer @ http://www.the-scientist.com/?articles.view/articleNo/36108/title/Bacterial-DNA-in-Human-Genomes/ #Cancer]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/news/view/92/genomic-impact</guid>
	<pubDate>Wed, 10 Jul 2013 01:33:50 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/92/genomic-impact</link>
	<title><![CDATA[Genomic Impact]]></title>
	<description><![CDATA[The ongoing genomic research in USA&nbsp;contributed $31 billion to the U.S. gross national product and helped support 152,000 jobs.&nbsp;
Reference:&nbsp;http://www.unitedformedicalresearch.com/wp-content/uploads/2013/06/The-Impact-of-Genomics-on-the-US-Economy.pdf]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/news/view/120/user</guid>
	<pubDate>Wed, 10 Jul 2013 14:41:49 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/120/user</link>
	<title><![CDATA[useR!]]></title>
	<description><![CDATA[The R project actively supports two conference series, organized regularly by members from the R community: useR! - providing a forum to the R user community - and DSC - a platform for developers of statistica...]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/840/junior-research-fellow-jrf</guid>
	<pubDate>Sat, 13 Jul 2013 11:17:22 -0500</pubDate>
	<link>https://bioinformaticsonline.com/opportunity/view/840/junior-research-fellow-jrf</link>
	<title><![CDATA[Junior Research Fellow (JRF)]]></title>
	<description><![CDATA[School of Biotechnology
Gautam Buddha University
Greater Noida, UP - 201310

Applications are invited for one position of Junior Research Fellow (JRF) in a Department of Biotechnology (DBT) sponsored resea...]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/841/research-fellow</guid>
	<pubDate>Sat, 13 Jul 2013 11:23:20 -0500</pubDate>
	<link>https://bioinformaticsonline.com/opportunity/view/841/research-fellow</link>
	<title><![CDATA[Research Fellow]]></title>
	<description><![CDATA[UNIVERSITY OF CALCUTTA

A walk-in-interview will be held on 15.7.2013 at 12 noon in the Department of Biophysics, Molecular Biology and Bioinformatics, 92 A.P.C Road, Kolkata-700 009 to select one trainee re...]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/846/mona-singh-lab</guid>
	<pubDate>Sat, 13 Jul 2013 17:34:09 -0500</pubDate>
	<link>https://bioinformaticsonline.com/researchlabs/view/846/mona-singh-lab</link>
	<title><![CDATA[Mona Singh Lab]]></title>
	<description><![CDATA[The group develops algorithms for a diverse set of problems in computational molecular biology. They are particularly interested in predicting specificity in protein interactions and uncovering how molecular i...]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/847/nedelec-lab</guid>
	<pubDate>Sat, 13 Jul 2013 17:38:55 -0500</pubDate>
	<link>https://bioinformaticsonline.com/researchlabs/view/847/nedelec-lab</link>
	<title><![CDATA[Nedelec Lab]]></title>
	<description><![CDATA[Location :European Molecular Biology Laboratory (EMBL), Heidelberg, Germany.

Our long-term research objective is to understand microtubule organization in living cells, with an emphasis on mitosis. We devel...]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/videolist/watch/6665/fertilization-conception</guid>
	<pubDate>Fri, 22 Nov 2013 03:00:35 -0600</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/6665/fertilization-conception</link>
	<title><![CDATA[Fertilization (Conception)]]></title>
	<description><![CDATA[View more AMAZING medical animations at http://www.nucleuslibrary.com

To download FREE medical animations of pregnancy and birth, visit http://www.prenateperl.com/yt2012  This 3D medical animation shows human...]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/videolist/watch/2791/ncbi-psi-blast-tutorial</guid>
	<pubDate>Fri, 23 Aug 2013 02:25:02 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/2791/ncbi-psi-blast-tutorial</link>
	<title><![CDATA[NCBI PSI-BLAST Tutorial]]></title>
	<description><![CDATA[http:--www.biotechnology.jhu.edu-
Tutorial for PSI-BLAST, an extension of BLAST that uses matrix algebra. BLAST is a cornerstone bioinformatics tool at NCBI. BLAST is the
Basic Local Alignment Search tool and will protein and DNA sequences that
are related to a sequence that the user provides.]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/snippets/view/37015/install-perl-locally</guid>
	<pubDate>Fri, 22 Jun 2018 05:26:42 -0500</pubDate>
	<link>https://bioinformaticsonline.com/snippets/view/37015/install-perl-locally</link>
	<title><![CDATA[Install Perl Locally !]]></title>
	<description><![CDATA[# To follow these instructions, we'll assume your system admins have already installed these essentials:
# Debian/Ubuntu system admins should run:
sudo apt-get install -y build-essential libexpat1-dev libssl...]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/snippets/view/43000/python-script-to-download-covid-genome</guid>
	<pubDate>Fri, 26 Mar 2021 07:01:29 -0500</pubDate>
	<link>https://bioinformaticsonline.com/snippets/view/43000/python-script-to-download-covid-genome</link>
	<title><![CDATA[Python script to download covid genome !]]></title>
	<description><![CDATA[#!/usr/bin/env python3

# these are the publicly available "complete" sequences
# https://www.gisaid.org/ has more (1200?), but they require you to sign up

import requests
import yaml

seqs = yaml.loa...]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/bookmarks/view/43090/loretta-a-user-friendly-tool-for-assembling-viral-genomes-from-pacbio-sequence-data#annotation-4110</guid>
	<pubDate>Sat, 08 Jun 2024 16:01:21 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/43090/loretta-a-user-friendly-tool-for-assembling-viral-genomes-from-pacbio-sequence-data#annotation-4110</link>
	<title><![CDATA[Comment on "LoReTTA, a user-friendly tool for assembling viral genomes from PacBio sequence data" by Abhi]]></title>
	<description><![CDATA[Detail paper here&nbsp;https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8111061/]]></description>
</item>

<item>
	<guid isPermaLink='true'>https://bioinformaticsonline.com/blog/view/35923/basic-command-line-to-run-blast#annotation-4088</guid>
	<pubDate>Mon, 03 Apr 2023 12:11:14 -0500</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/35923/basic-command-line-to-run-blast#annotation-4088</link>
	<title><![CDATA[Comment on "Basic command-line to run BLAST" by LEGE]]></title>
	<description><![CDATA[Understanding the parameters&nbsp;
https://www.arabidopsis.org/Blast/BLASToptions.jsp]]></description>
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