Bioinformatics tools developed for Oxford Nanopore data analysis !
...rtable real-time device for DNA and RNA sequencing. Each consumable flow cell can now generate 10–20 Gb of DNA sequence data. Ultra-long read lengths are possibl...2466 days ago
Bioinformatics tools for telomere to telomere assembly !
...) calls in VCF format (Aaron Wenger)● JumboDB – tool for de Bruijn graph construction (Anton Bankevich @AntonBankevich)● uLTRA – tool for splice...1137 days ago
Latest paper on comparison of mapping tools
....com/gmap/ RMAP http://rulai.cshl.edu/rmap/ mrsFAST http://mrsfast.sourceforge.net/Home http://sourceforge.net/projects/mrsfast/files/mrsfast-ultra-3.1.0/ BFAST http://sourcef...4042 days ago
3704 days ago
Genome Assembly Tools and Software - PART2 !!
...hoRAH is a software package that allows for inference about the structure of a population from a set of short sequence reads as obtained from ultra-deep sequencing of a mixed sa...2831 days ago
Commercial and public next-gen-seq (NGS) software
...en by Nils Homer, Stanley F. Nelson and Barry Merriman at UCLA.Bowtie - Ultrafast, memory-efficient short r...Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read al...3664 days ago
Software packages for next gen sequence analysis
...by Nils Homer, Stanley F. Nelson and Barry Merriman at UCLA. * Bowtie - Ultrafast, memory-efficient short r...Seq reads. It aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read al...3388 days ago
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2517 days ago
Postdoctoral Fellowship in Bioinformatics at pesolelab
Job Description: Bioinformatics postdoc positions are available in the area of genomics with main focus on exome and RNAseq technologies by ultra high-throughput sequencing platforms...3284 days ago
Bioinformatics jobs at Chittaranjan National Cancer Institute
...stem cell research and gene therapy Molecular cancer immunology and immunotherapy Molecular epidemiology Tumor endocrinology Translation research Ultra structural/tissue engg/develo...2920 days ago
MMseqs2.0: ultra fast and sensitive protein search and clustering suite
MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein sequence sets. MMseqs2 is open source GPL-licensed software implemented in C++ for Linux, MacOS, and (as beta version, via cygwin) Windows. The software is designed to run on multiple cores and s...Tags: MMseqs2, ultra, fast, sensitive, protein, search, clustering, suite
2381 days ago
NGS Platforms launched by BGI’s MGI Tech
MGI Tech Co., Ltd. (MGI), a subsidiary of BGI Group, is committed to enabling effective and affordable healthcare solutions for all. Based on its proprietary technology, MGI produces sequencing devices, equipment, consumables and reagents to support life science research, medicine and healthcare....Tags: MGI, china, genomics, BGI Group, announced, pricing, ultra, high-throughput, sequencer, MGISEQ-T7, sequencing, cost, gigabyte
2087 days ago
Comment on "Does anyone have Nanopore latest updates?"
Sequencing ultra-long DNA molecules with the Oxford Nanopore MinION http://biorxiv.org/content/early/2015/05/20/019281.full-text.pdf+html Additional tools for analyzing Oxford Nanopore minION data by John Urban https://github.com/JohnUrban/poreminion3417 days ago