https://bioinformaticsonline.com/snippets/view/41964/get-gc-across-the-entire-cds? https://bioinformaticsonline.com/snippets/view/41964/get-gc-across-the-entire-cds Sun, 12 Jul 2020 05:30:24 -0500 https://bioinformaticsonline.com/snippets/view/41964/get-gc-across-the-entire-cds #look at GC across the entire CDS. gffread -x - -g <genome.fasta> <annotation.gff> | \ seqtk comp - | \ awk -v OFS="\t" '{ print $1, "0", $2, ($4 + $5) / $2 }']]> Jit