https://bioinformaticsonline.com/snippets/view/43079/install-trimmomatic-using-conda? https://bioinformaticsonline.com/snippets/view/43079/install-trimmomatic-using-conda Wed, 16 Jun 2021 02:32:43 -0500 https://bioinformaticsonline.com/snippets/view/43079/install-trimmomatic-using-conda vik@vik-Lenovo-ideapad-320-15ISK:~/Downloads/setu/setu$ conda install -c bioconda trimmomatic Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists. <== current version: 4.9.2 latest version: 4.10.1 Please update conda by running $ conda update -n base -c defaults conda ## Package Plan ## environment location: /home/vik/anaconda3/envs/vikENV added / updated specs: - trimmomatic The following packages will be downloaded: package | build ---------------------------|----------------- certifi-2021.5.30 | py37h06a4308_0 139 KB openjdk-8.0.152 | h7b6447c_3 57.4 MB trimmomatic-0.39 | hdfd78af_2 144 KB bioconda ------------------------------------------------------------ Total: 57.6 MB The following NEW packages will be INSTALLED: openjdk pkgs/main/linux-64::openjdk-8.0.152-h7b6447c_3 trimmomatic bioconda/noarch::trimmomatic-0.39-hdfd78af_2 The following packages will be SUPERSEDED by a higher-priority channel: certifi conda-forge::certifi-2021.5.30-py37h8~ --> pkgs/main::certifi-2021.5.30-py37h06a4308_0 Proceed ([y]/n)? y Downloading and Extracting Packages certifi-2021.5.30 | 139 KB | ################################################################################################################################################################## | 100% openjdk-8.0.152 | 57.4 MB | ################################################################################################################################################################## | 100% trimmomatic-0.39 | 144 KB | ################################################################################################################################################################## | 100% Preparing transaction: done Verifying transaction: done Executing transaction: done]]> LEGE