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	<title><![CDATA[BOL: Install Install Gffcompare on Ubuntu / Linux]]></title>
	<link>https://bioinformaticsonline.com/snippets/view/43758/install-install-gffcompare-on-ubuntu-linux?</link>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/snippets/view/43758/install-install-gffcompare-on-ubuntu-linux</guid>
	<pubDate>Wed, 02 Feb 2022 02:34:18 -0600</pubDate>
	<link>https://bioinformaticsonline.com/snippets/view/43758/install-install-gffcompare-on-ubuntu-linux</link>
	<title><![CDATA[Install Install Gffcompare on Ubuntu / Linux]]></title>
	<description><![CDATA[<code>#Gffcompare is a program that is used to perform operations on general feature format (GFF) and general transfer format (GTF) files. It has a binary distribution compatible with the linux we’re using so we will just download, extract, and make a symlink.

# download and extract
cd ~/workspace/bin
wget http://ccb.jhu.edu/software/stringtie/dl/gffcompare-0.9.8.Linux_x86_64.tar.gz
tar -xzvf gffcompare-0.9.8.Linux_x86_64.tar.gz

# make symlink
ln -s ~/workspace/bin/gffcompare-0.9.8.Linux_x86_64/gffcompare ~/workspace/bin/gffcompare

# check Installation
~/workspace/bin/gffcompare</code>]]></description>
	<dc:creator>Abhi</dc:creator>
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