https://bioinformaticsonline.com/snippets/view/43760/install-stringtie-on-ubuntu-linux? https://bioinformaticsonline.com/snippets/view/43760/install-stringtie-on-ubuntu-linux Wed, 02 Feb 2022 02:36:02 -0600 https://bioinformaticsonline.com/snippets/view/43760/install-stringtie-on-ubuntu-linux #StringTie is a software program to perform transcript assembly and quantification of RNAseq data. The binary distributions are available so to install we can just download this distribution and extract it. Like with our other programs we also make a symlink to make it easier to find. # download and extract cd ~/workspace/bin wget http://ccb.jhu.edu/software/stringtie/dl/stringtie-1.3.0.Linux_x86_64.tar.gz tar -xzvf stringtie-1.3.0.Linux_x86_64.tar.gz # make symlink ln -s ~/workspace/bin/stringtie-1.3.0.Linux_x86_64/stringtie ~/workspace/bin/stringtie # test installation ~/workspace/bin/stringtie -h]]> Abhi