https://bioinformaticsonline.com/snippets/view/43824/update-conda? https://bioinformaticsonline.com/snippets/view/43824/update-conda Sat, 12 Mar 2022 07:33:25 -0600 https://bioinformaticsonline.com/snippets/view/43824/update-conda (base) [me@hn1 ME]$ conda update conda Collecting package metadata (current_repodata.json): done Solving environment: done ## Package Plan ## environment location: /home/me/anaconda3 added / updated specs: - conda The following packages will be downloaded: package | build ---------------------------|----------------- coreutils-8.32 | h7b6447c_0 2.6 MB gawk-5.1.0 | h7b6447c_0 1007 KB libdeflate-1.8 | h7f8727e_5 51 KB xmltodict-0.12.0 | pyhd3eb1b0_0 13 KB ------------------------------------------------------------ Total: 3.7 MB The following packages will be REMOVED: entrez-direct-15.6-he881be0_1 perl-archive-tar-2.32-pl526_0 perl-carp-1.38-pl526_3 perl-common-sense-3.74-pl526_2 perl-compress-raw-bzip2-2.087-pl526he1b5a44_0 perl-compress-raw-zlib-2.087-pl526hc9558a2_0 perl-exporter-5.72-pl526_1 perl-exporter-tiny-1.002001-pl526_0 perl-extutils-makemaker-7.36-pl526_1 perl-io-compress-2.087-pl526he1b5a44_0 perl-io-zlib-1.10-pl526_2 perl-json-4.02-pl526_0 perl-json-xs-2.34-pl526h6bb024c_3 perl-list-moreutils-0.428-pl526_1 perl-list-moreutils-xs-0.428-pl526_0 perl-pathtools-3.75-pl526h14c3975_1 perl-scalar-list-utils-1.52-pl526h516909a_0 perl-types-serialiser-1.0-pl526_2 perl-xsloader-0.24-pl526_0 The following packages will be UPDATED: coreutils bioconda::coreutils-8.25-1 --> pkgs/main::coreutils-8.32-h7b6447c_0 jemalloc bioconda::jemalloc-4.5.0-0 --> pkgs/main::jemalloc-5.2.1-h2531618_5 libdeflate bioconda::libdeflate-1.2-h516909a_1 --> pkgs/main::libdeflate-1.8-h7f8727e_5 The following packages will be SUPERSEDED by a higher-priority channel: gawk conda-forge::gawk-5.1.0-h516909a_0 --> pkgs/main::gawk-5.1.0-h7b6447c_0 The following packages will be DOWNGRADED: xmltodict 0.12.0-py_0 --> 0.12.0-pyhd3eb1b0_0 Proceed ([y]/n)? y Downloading and Extracting Packages libdeflate-1.8 | 51 KB | ########################################################################################################################################################## | 100% coreutils-8.32 | 2.6 MB | ########################################################################################################################################################## | 100% gawk-5.1.0 | 1007 KB | ########################################################################################################################################################## | 100% xmltodict-0.12.0 | 13 KB | ########################################################################################################################################################## | 100% Preparing transaction: done Verifying transaction: done Executing transaction: done]]> Rahul Nayak