https://bioinformaticsonline.com/thewire/all?offset=360 https://bioinformaticsonline.com/thewire/view/38932 Sun, 10 Feb 2019 12:05:32 -0600 https://bioinformaticsonline.com/thewire/view/38932 https://docs.microsoft.com/en-us/machine-learning-server/deployr/deployr-about #Rscripts #into #analytics #web #services

]]> Rahul Agarwal https://bioinformaticsonline.com/thewire/view/38930 Sun, 10 Feb 2019 12:03:44 -0600 https://bioinformaticsonline.com/thewire/view/38930 http://impala.molgen.mpg.de/ #metabolomics #proteomics #pathway #analysis

]]> Rahul Agarwal https://bioinformaticsonline.com/thewire/view/38928 Sun, 10 Feb 2019 12:02:38 -0600 https://bioinformaticsonline.com/thewire/view/38928 https://lipea.biotec.tu-dresden.de/home #Lipid #pathway #Analysis

]]> Rahul Agarwal https://bioinformaticsonline.com/thewire/view/38926 Sun, 10 Feb 2019 12:01:28 -0600 https://bioinformaticsonline.com/thewire/view/38926 https://irkernel.github.io/ #R #kernelfor #Jupyter #Notebook

]]> Rahul Agarwal https://bioinformaticsonline.com/thewire/view/38924 Sun, 10 Feb 2019 12:00:03 -0600 https://bioinformaticsonline.com/thewire/view/38924 https://github.com/jbytecode/rcaller #R #JAVA

]]> Rahul Agarwal https://bioinformaticsonline.com/thewire/view/38922 Sun, 10 Feb 2019 11:59:18 -0600 https://bioinformaticsonline.com/thewire/view/38922 https://archive.codeplex.com/?p=rclr #R #dotNET

]]> Rahul Agarwal https://bioinformaticsonline.com/thewire/view/38920 Sun, 10 Feb 2019 11:58:11 -0600 https://bioinformaticsonline.com/thewire/view/38920 https://www.rplumber.io/ #R #Rcode2webAPI

]]> Rahul Agarwal https://bioinformaticsonline.com/thewire/view/38918 Sun, 10 Feb 2019 11:57:03 -0600 https://bioinformaticsonline.com/thewire/view/38918 https://cran.r-project.org/web/packages/RGtk2/index.html #R #GUI

]]> Rahul Agarwal https://bioinformaticsonline.com/thewire/view/38916 Sun, 10 Feb 2019 11:56:06 -0600 https://bioinformaticsonline.com/thewire/view/38916 https://rstudio.github.io/packrat/ #R #production

]]> Rahul Agarwal https://bioinformaticsonline.com/thewire/view/38914 Sat, 09 Feb 2019 20:51:50 -0600 https://bioinformaticsonline.com/thewire/view/38914 Diagram https://github.com/d3/d3/wiki/Gallery #Plot #Visualisation

]]> BioJoker https://bioinformaticsonline.com/thewire/view/38911 Fri, 08 Feb 2019 07:34:24 -0600 https://bioinformaticsonline.com/thewire/view/38911 Machine learning meets genome assembly https://academic.oup.com/bib/advance-article-abstract/doi/10.1093/bib/bby072/5074612 #genome #assembly #machine #learning

]]> Jit https://bioinformaticsonline.com/thewire/view/38904 Tue, 05 Feb 2019 17:20:02 -0600 https://bioinformaticsonline.com/thewire/view/38904 samtools view -Sb pilonCor_round1.fasta.out.sam | samtools sort -m 4G -@ 40 -o pilonCor_round1.fasta.out.sorted.bam - && samtools index -@ 40 pilonCor_round1.fasta.out.sorted.bam #SAM2BAM

]]> Jit https://bioinformaticsonline.com/thewire/view/38901 Tue, 05 Feb 2019 11:41:49 -0600 https://bioinformaticsonline.com/thewire/view/38901 set the path for python alias python="/usr/bin/python3.3" #python #path #set

]]> BioJoker https://bioinformaticsonline.com/thewire/view/38898 Mon, 04 Feb 2019 13:26:13 -0600 https://bioinformaticsonline.com/thewire/view/38898 samtools mpileup -uf reference.nt mapping.bam | bcftools call -c | vcfutils.pl vcf2fq > consensus.fasta #Genome #Assembly #Reference

]]> Jit https://bioinformaticsonline.com/thewire/view/38882 Fri, 01 Feb 2019 09:01:02 -0600 https://bioinformaticsonline.com/thewire/view/38882 The aim of this program suite is to support checks of #Sequence #Variant #Nomenclature according to the guidelines of the #Human #Genome #Variation Society. https://www.mutalyzer.nl/

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