BOL: All wire posts

Wire post by LEGE

LEGE — Wed, 15 Sep 2021 13:23:14 -0500

Bioinformatics Hackathon Africa https://dataleadafrica.com/programs/ #Africa #Hackthon

Wire post by Jit

Jit — Sun, 12 Sep 2021 22:56:14 -0500

#CoViD #miner #tools https://translational-medicine.biomedcentral.com/articles/10.1186/s12967-020-02675-4

Wire post by LEGE

LEGE — Thu, 02 Sep 2021 06:41:33 -0500

Count number of fasta sequence $ awk '/^>/ { f = !a[$0]++ } f' aaaa.fa > bbbb.fa #count #fasta #oneliner

Wire post by LEGE

LEGE — Thu, 02 Sep 2021 03:37:22 -0500

Snakemake pipeline https://git.scicore.unibas.ch/zavolan_public/A-seq2-processing #A-Seq2 #Snakemake

Wire post by Jit

Jit — Wed, 01 Sep 2021 02:08:27 -0500

#NLP-MeTaxa: A Natural Language Processing Approach for #Metagenomic #Taxonomic #Binning Based on Deep Learning https://github.com/padriba/NLP_MeTaxa/

Wire post by Jit

Jit — Tue, 31 Aug 2021 00:40:53 -0500

Understanding Covid variant https://sangerinstitute.blog/2021/06/29/covid-connections-variant-or-villain/ #Covid #Variant #Disease #SARS-Cov2

Wire post by Jit

Jit — Sat, 28 Aug 2021 01:28:26 -0500

#Ten simple #rules for organizing a #bioinformatics #training #course in low- and #middle-income countries https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1009218

Wire post by Neel

Neel — Fri, 27 Aug 2021 05:22:14 -0500

Bioinformatics summit at Delhi, India https://webs.iiitd.edu.in/hitsummit/ #Free #Summit #HIT #Health

Wire post by Neel

Neel — Thu, 26 Aug 2021 10:21:48 -0500

#RepExpress: A Novel #Pipeline for the Quantification and Characterization of #Transposable #Element #Expression from RNA-seq Data https://pubmed.ncbi.nlm.nih.gov/34387946/

Wire post by BioStar

BioStar — Mon, 23 Aug 2021 10:55:09 -0500

RNA seq tutorial https://github.com/griffithlab/rnaseq_tutorial #Tutorial #RNA_seq

Wire post by Jit

Jit — Sat, 21 Aug 2021 12:25:52 -0500

Whole genome alignment https://pdfs.semanticscholar.org/f64b/68973f1e836e1fcf697de709c3ffb1225ce5.pdf #Whole #Genome #Alignment #PPT

Wire post by Jit

Jit — Sat, 21 Aug 2021 12:20:44 -0500

Evolutionary evidence of chromosomal rearrangements through SNAP https://www.diva-portal.org/smash/get/diva2:1580925/FULLTEXT01.pdf #Bioinformatics #Computational

Wire post by Jit

Jit — Sat, 21 Aug 2021 12:05:31 -0500

https://www.sciencemag.org/news/2021/08/new-sars-cov-2-variants-have-changed-pandemic-what-will-virus-do-next? #Pandemic #Variants

Wire post by Jit

Jit — Fri, 20 Aug 2021 10:35:30 -0500

#Convert #FASTQ to FASTA and set bases of #quality lower than 20 to N $ seqtk seq -aQ64 -q20 -n N IN.fastq > OUT.fasta

Wire post by BioStar

BioStar — Thu, 19 Aug 2021 02:55:23 -0500

HOW TO CONVERT A PYTHON SCRIPT TO MODULE https://tutswiki.com/convert-python-script-to-module/ #Module #Python