<![CDATA[BOL: Abhimanyu Singh's wire posts]]> https://bioinformaticsonline.com/thewire/owner/abhimanyu?offset=15 https://bioinformaticsonline.com/thewire/view/39226 Sun, 07 Apr 2019 22:01:55 -0500 https://bioinformaticsonline.com/thewire/view/39226 <![CDATA[Wire post by Abhimanyu Singh]]> What is #mutation? A chapter in the series: How #microbes “jeopardize” the modern synthesis https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1007995

]]> Abhimanyu Singh https://bioinformaticsonline.com/thewire/view/39206 Sun, 31 Mar 2019 20:58:06 -0500 https://bioinformaticsonline.com/thewire/view/39206 <![CDATA[Wire post by Abhimanyu Singh]]> Using R: #plotting the #genome on a line https://www.r-bloggers.com/using-r-plotting-the-genome-on-a-line/ . #plot #R

]]> Abhimanyu Singh https://bioinformaticsonline.com/thewire/view/39056 Sun, 03 Mar 2019 19:40:44 -0600 https://bioinformaticsonline.com/thewire/view/39056 <![CDATA[Wire post by Abhimanyu Singh]]> Top 20 Python AI and Machine Learning Open Source Projects https://www.dataquest.io/blog/top-20-python-ai-and-machine-learning-open-source-projects/ #Projects #Open #Python #AI

]]> Abhimanyu Singh https://bioinformaticsonline.com/thewire/view/39012 Fri, 15 Feb 2019 09:34:13 -0600 https://bioinformaticsonline.com/thewire/view/39012 <![CDATA[Wire post by Abhimanyu Singh]]> Mutalyzer website https://www.mutalyzer.nl/ #Mutation #Analysis

]]> Abhimanyu Singh https://bioinformaticsonline.com/thewire/view/38687 Mon, 14 Jan 2019 17:53:32 -0600 https://bioinformaticsonline.com/thewire/view/38687 <![CDATA[Wire post by Abhimanyu Singh]]> Indian https://io9.gizmodo.com/this-prehistoric-pocket-deer-has-fewer-chromosomes-than-1705706404 #muntjac #chromosome #breakpoints

]]> Abhimanyu Singh https://bioinformaticsonline.com/thewire/view/38685 Mon, 14 Jan 2019 17:39:48 -0600 https://bioinformaticsonline.com/thewire/view/38685 <![CDATA[Wire post by Abhimanyu Singh]]> https://www.broadinstitute.org/mammals-models/29-mammals-project #29 #MAMMALS #PROJECT

]]> Abhimanyu Singh https://bioinformaticsonline.com/thewire/view/38360 Sat, 01 Dec 2018 15:34:45 -0600 https://bioinformaticsonline.com/thewire/view/38360 <![CDATA[Wire post by Abhimanyu Singh]]> Interesting plotting options in R https://www.r-graph-gallery.com/ #plot #graph #R

]]> Abhimanyu Singh https://bioinformaticsonline.com/thewire/view/38308 Wed, 28 Nov 2018 08:52:32 -0600 https://bioinformaticsonline.com/thewire/view/38308 <![CDATA[Wire post by Abhimanyu Singh]]> Selfish genetic elements https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1007700 #genetics #selfish #genome

]]> Abhimanyu Singh https://bioinformaticsonline.com/thewire/view/38221 Thu, 15 Nov 2018 08:17:57 -0600 https://bioinformaticsonline.com/thewire/view/38221 <![CDATA[Wire post by Abhimanyu Singh]]> #Intersect your bed data with coverage $ bedtools genomecov -ibam aln.bam -bga | awk '$4==0' | bedtools intersect -a cds.bed -b - -f 1.0

]]> Abhimanyu Singh https://bioinformaticsonline.com/thewire/view/38152 Tue, 06 Nov 2018 17:10:04 -0600 https://bioinformaticsonline.com/thewire/view/38152 <![CDATA[Wire post by Abhimanyu Singh]]> Louvain algorithm https://neo4j.com/docs/graph-algorithms/current/algorithms/louvain/ #Louvain #algorithm

]]> Abhimanyu Singh https://bioinformaticsonline.com/thewire/view/38037 Tue, 30 Oct 2018 10:27:32 -0500 https://bioinformaticsonline.com/thewire/view/38037 <![CDATA[Wire post by Abhimanyu Singh]]> Visualize the chromosomes http://visualization.ritchielab.org/ #PhenoGram

]]> Abhimanyu Singh https://bioinformaticsonline.com/thewire/view/38034 Tue, 30 Oct 2018 10:16:55 -0500 https://bioinformaticsonline.com/thewire/view/38034 <![CDATA[Wire post by Abhimanyu Singh]]> http://www.bioconductor.org/packages/release/bioc/vignettes/Gviz/inst/doc/Gviz.pdf #Plot #Chr

]]> Abhimanyu Singh https://bioinformaticsonline.com/thewire/view/38026 Sun, 28 Oct 2018 18:30:29 -0500 https://bioinformaticsonline.com/thewire/view/38026 <![CDATA[Wire post by Abhimanyu Singh]]> http://www.jaduniv.edu.in/upload_files/scroll_info/1537868817.pdf Bioinformatics #Jobs

]]> Abhimanyu Singh https://bioinformaticsonline.com/thewire/view/37824 Tue, 02 Oct 2018 18:23:57 -0500 https://bioinformaticsonline.com/thewire/view/37824 <![CDATA[Wire post by Abhimanyu Singh]]> #SSPACE Basic, SSAKE-based #Scaffolding of Pre-Assembled Contigs after Extension https://github.com/nsoranzo/sspace_basic

]]> Abhimanyu Singh https://bioinformaticsonline.com/thewire/view/37822 Tue, 02 Oct 2018 18:21:27 -0500 https://bioinformaticsonline.com/thewire/view/37822 <![CDATA[Wire post by Abhimanyu Singh]]> #BLASTCLUST - BLAST score-based single-linkage #clustering. http://nebc.nerc.ac.uk/bioinformatics/documentation/blast/blastclust.html

]]> Abhimanyu Singh