BOL: Abhimanyu Singh's wire posts

Wire post by Abhimanyu Singh

Abhimanyu Singh — Thu, 06 Sep 2018 16:33:41 -0500

Efficiency of #PacBio long read #correction by 2nd generation #Illumina sequencing https://www.sciencedirect.com/science/article/pii/S0888754317301660

Wire post by Abhimanyu Singh

Abhimanyu Singh — Tue, 20 Mar 2018 05:13:07 -0500

EMBO course at http://meetings.embo.org/event/18-computational-evolution #EMBO #Course #Meeting "Evolution #Course

Wire post by Abhimanyu Singh

Abhimanyu Singh — Mon, 05 Feb 2018 19:02:21 -0600

Important #NGS tutorial http://userweb.eng.gla.ac.uk/umer.ijaz/bioinformatics/linux.html

Wire post by Abhimanyu Singh

Abhimanyu Singh — Fri, 05 Jan 2018 08:38:55 -0600

Learning algorithm with coding http://rosettacode.org/wiki/Rosetta_Code #Rosetta #code #learn #algorithms

Wire post by Abhimanyu Singh

Abhimanyu Singh — Fri, 14 Jul 2017 09:05:46 -0500

https://longhowlam.wordpress.com/2017/07/13/interactive-sunburst-graphs-in-power-bi-in-5-minutes/ #R #sunburst #plot

Wire post by Abhimanyu Singh

Abhimanyu Singh — Mon, 15 May 2017 05:11:08 -0500

Software from #Steven #Salzberg, #Lab https://salzberg-lab.org/software/

Wire post by Abhimanyu Singh

Abhimanyu Singh — Thu, 11 May 2017 10:43:18 -0500

fastq to fasta convertor $ sed -n '1~4s/^@/>/p;2~4p' test.fastq > test.fasta #Convert #Fasta #Fastq #fa #fq

Wire post by Abhimanyu Singh

Abhimanyu Singh — Fri, 05 May 2017 14:20:37 -0500

Augustus 3.2 location https://fossies.org/linux/misc/augustus-3.2.3.tar.gz/ #Genes #Augustus #Predict

Wire post by Abhimanyu Singh

Abhimanyu Singh — Tue, 02 May 2017 11:31:32 -0500

Show before(B) and after(A) the matching region $ grep -B 3 -A 2 foo README.txt #Linux #Tricks #View #Grep

Wire post by Abhimanyu Singh

Abhimanyu Singh — Thu, 23 Mar 2017 12:26:40 -0500

Database of BioSamples http://www.ezbiocloud.net/ #Classification #Bio #Genes #Species #Taxonomy

Wire post by Abhimanyu Singh

Abhimanyu Singh — Mon, 13 Mar 2017 08:28:36 -0500

#Random #sequence generator with #perloneliner : $ perl -e '$x=int(rand(1000)); printf( "chr1\t%s\t%s", $x, $x + 10)'

Wire post by Abhimanyu Singh

Abhimanyu Singh — Mon, 13 Mar 2017 06:13:21 -0500

#Extract a #sequence from #multi-fasta file: $ perl -ne 'if(/^>(\S+)/){$c=grep{/^$1$/}qw(id1 id2)}print if $c' fasta.file

Wire post by Abhimanyu Singh

Abhimanyu Singh — Fri, 10 Mar 2017 15:03:02 -0600

Try this on terminal;) $ while (true) do echo -n "BOL is awesome and amazing website "; done

Wire post by Abhimanyu Singh

Abhimanyu Singh — Thu, 09 Mar 2017 03:56:23 -0600

Selecting the Right #Similarity-Scoring #Matrix https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3848038/

Wire post by Abhimanyu Singh

Abhimanyu Singh — Tue, 07 Mar 2017 10:07:12 -0600

Assembly comparison https://github.com/WGLab/uniline/tree/master/src/assembly_comparison #NGS #Assembly #MUMMer