<![CDATA[BOL: biogeek's wire posts]]> https://bioinformaticsonline.com/thewire/owner/biogeek? https://bioinformaticsonline.com/thewire/view/41416 Wed, 11 Mar 2020 08:33:06 -0500 https://bioinformaticsonline.com/thewire/view/41416 <![CDATA[Wire post by biogeek]]> GTN: A genome structure analysis tool http://homepage.fudan.edu.cn/zhouyan/files/2013/09/GNT_manual_v1.0.0.pdf #Tool #Genome #Validation

]]> biogeek https://bioinformaticsonline.com/thewire/view/41217 Sat, 22 Feb 2020 01:06:35 -0600 https://bioinformaticsonline.com/thewire/view/41217 <![CDATA[Wire post by biogeek]]> Useful bioinformatics database for GATK analysis ftp://ftp.broadinstitute.org/bundle/hg38/ #GATK #Database

]]> biogeek https://bioinformaticsonline.com/thewire/view/41204 Thu, 20 Feb 2020 05:45:12 -0600 https://bioinformaticsonline.com/thewire/view/41204 <![CDATA[Wire post by biogeek]]> (grep ^"#" in.gff; grep -v ^"#" in.gff | sort -k1,1 -k4,4n) | bgzip > sorted.gff.gz;

tabix -p gff sorted.gff.gz; #GATK

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