BOL: Manisha Mishra's wire posts

Wire post by Manisha Mishra

Manisha Mishra — Thu, 15 Oct 2020 04:02:55 -0500

A guide for the lonely bioinformatician http://www.opiniomics.org/a-guide-for-the-lonely-bioinformatician/ #Bioinformatician #Lonely #Pet #Focus #Future

Wire post by Manisha Mishra

Manisha Mishra — Sat, 12 May 2018 05:25:24 -0500

Bioinformatics Faculty Jobs at MAHARSHI DAYANAND UNIVERSITY, ROHTAK http://www.mdurohtak.ac.in/pdf18/Advt/ADvertisement%2028%20of%202018.pdf #MDU #ROHTAK

Wire post by Manisha Mishra

Manisha Mishra — Tue, 17 Apr 2018 17:43:19 -0500

Remove the sequence by fasta ids. awk 'BEGIN{while((getline<"ids.txt")>0)l[">"$1]=1}/^>/{f=!l[$1]}f' seq.fa #Remove #Delete #ids #fasta

Wire post by Manisha Mishra

Manisha Mishra — Tue, 17 Apr 2018 16:37:42 -0500

Extract fasta with Ids. $ perl -ne 'if(/^>(\S+)/){$c=grep{/^$1$/}qw(id1 id2)}print if $c' fasta.file #extract #fasta #sequence #ids

Wire post by Manisha Mishra

Manisha Mishra — Tue, 04 Aug 2015 20:42:17 -0500

Orange Bioinformatics add-on for Orange data mining software package. https://pypi.python.org/pypi/Orange-Bioinformatics/2.6.7 #Orange #Python #DataMining

Wire post by Manisha Mishra

Manisha Mishra — Fri, 19 Sep 2014 16:09:40 -0500

eMatchSite: Sequence Order-Independent Structure Alignments of Ligand Binding Pockets in Protein Models http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1003829 #Protein #Binding

Wire post by Manisha Mishra

Manisha Mishra — Sun, 24 Aug 2014 02:15:00 -0500

Research into proteomics data analysis, reuse & validation. http://gpmdb.thegpm.org/ #GPMDB #Repository Proteomics

Wire post by Manisha Mishra

Manisha Mishra — Sun, 24 Aug 2014 02:06:06 -0500

ProteoStats: Computing false discovery rates in proteomics http://computationalproteomic.blogspot.co.uk/2014/08/proteostats-computing-false-discovery.html #Proteomics

Wire post by Manisha Mishra

Manisha Mishra — Fri, 22 Aug 2014 13:07:12 -0500

Pepper: Cytoscape app for Protein complex Expansion using Protein-Protein intERaction networks bioinformatics.oxfordjournals.org/content/early/2014/08/18/bioinformatics.btu517.short? #Protein #Interac

Wire post by Manisha Mishra

Manisha Mishra — Fri, 22 Aug 2014 12:53:50 -0500

Visualization of protein sequence features using JavaScript and SVG with pViz.js http://bioinformatics.oxfordjournals.org/content/early/2014/08/21/bioinformatics.btu567.short? #Protein #Visualize #Jav

Wire post by Manisha Mishra

Manisha Mishra — Thu, 14 Nov 2013 13:41:35 -0600

Artificial Life Simulator (in VB6) by Tanner Helland http://www.tannerhelland.com/1399/artificial-life-simulator-vb6/ #Evolution #SourceCode

Wire post by Manisha Mishra

Manisha Mishra — Tue, 15 Oct 2013 12:52:00 -0500

EMBO events http://www.embo.org/events #EMBO #Events