BOL: Rahul Nayak's wire posts

Wire post by Rahul Nayak

Rahul Nayak — Fri, 21 Jan 2022 21:14:54 -0600

Fold the FASTA sequences with length $ fold -w 100 genome.fa #Fasta #Genome #Fold #Break #Length

Wire post by Rahul Nayak

Rahul Nayak — Fri, 21 Jan 2022 11:06:53 -0600

https://endeavors.unc.edu/disassembling-evolutions-engine/ #Rotifers #Evolution

Wire post by Rahul Nayak

Rahul Nayak — Thu, 21 Jan 2021 02:47:17 -0600

mixtureS readme file at http://www.cs.ucf.edu/~xiaoman/mixtureS/README_linux.pdf #mixtureS #Tool

Wire post by Rahul Nayak

Rahul Nayak — Sun, 12 Apr 2020 23:26:13 -0500

Visualize genome in terminal https://asciigenome.readthedocs.io/en/latest/usage.html#quick-start #genome #visualisation

Wire post by Rahul Nayak

Rahul Nayak — Sun, 12 Apr 2020 06:15:18 -0500

Aerosol and Surface Stability of SARS-CoV-2
as Compared with SARS-CoV-1 https://www.nejm.org/doi/pdf/10.1056/NEJMc2004973 #corona #CoVID

Wire post by Rahul Nayak

Rahul Nayak — Sun, 05 Apr 2020 05:32:01 -0500

Extract the underscore separated values. $ awk '{split($0,a,"_"); print a[1]"_"a[2]}' aaa.txt | sort | uniq -u > all_ids_sm.txt #awk #bash #underscore #list

Wire post by Rahul Nayak

Rahul Nayak — Thu, 02 Apr 2020 09:35:30 -0500

Basics commands for Docker https://www.digitalocean.com/community/tutorials/how-to-remove-docker-images-containers-and-volumes #Docker #commands

Wire post by Rahul Nayak

Rahul Nayak — Wed, 26 Feb 2020 08:38:17 -0600

Bioinformatics #WalkIn for non-medical at RMRCNE, ICMR http://rmrcne.org.in/images/pdf/appoint/extramural_4380.pdf

Wire post by Rahul Nayak

Rahul Nayak — Mon, 10 Feb 2020 23:53:59 -0600

#Evolutionary Dynamics of #microRNA target sites across #vertebrate #evolution https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1008285

Wire post by Rahul Nayak

Rahul Nayak — Mon, 03 Feb 2020 04:29:12 -0600

#Nanopore GPU #basecalling using# GUPPY on #UBUNTU 18.04 and @nvidia docker v2 with a RTX 2080 https://medium.com/@kepler_00/nanopore-gpu-basecalling-using-guppy-on-ubuntu-18-04-and-nvidia-docker-v2-w

Wire post by Rahul Nayak

Rahul Nayak — Sat, 01 Feb 2020 03:27:40 -0600

Conda aligner env $ conda create -n aligners bwa bowtie hisat star #Aligner #Env

Wire post by Rahul Nayak

Rahul Nayak — Sat, 01 Feb 2020 00:44:21 -0600

Analyse your sample with GATK pipeline. https://app.terra.bio/ #GATK

Wire post by Rahul Nayak

Rahul Nayak — Tue, 31 Dec 2019 19:18:18 -0600

#PostDoc #opportunity at Finland https://predatorpreyinteractions.com/opportunities/

Wire post by Rahul Nayak

Rahul Nayak — Fri, 20 Dec 2019 01:44:48 -0600

Grep a term from a file in Linux. $ grep -A1 "term" input.fasta > output.fasta #Grep #Term

Wire post by Rahul Nayak

Rahul Nayak — Thu, 12 Dec 2019 23:00:29 -0600

http://www.nrcpb.res.in/writereaddata/files/opportunities/ICAR-NASF%20RA%20SRF%20interview%202019-converted_0.pdf #NIPB #Plant #WalkIn