BOL: Wire posts tagged with 'Convert'

Wire post by Rahul Nayak

Rahul Nayak — Thu, 08 Jun 2017 09:12:07 -0500

Convert masked genome to N letters. $ perl -pe '/^[^>]/ and $_=~ s/[a-z]/N/g' genomic.fna > genomic.N-masked.fna #Genome #Masked #N #Convert

Abhimanyu Singh — Thu, 11 May 2017 10:43:18 -0500

fastq to fasta convertor $ sed -n '1~4s/^@/>/p;2~4p' test.fastq > test.fasta #Convert #Fasta #Fastq #fa #fq

Jit — Wed, 10 May 2017 09:24:17 -0500

MAF2Synteny https://github.com/fenderglass/maf2synteny #Convert #Synteny #MAF #Ragout

Jit — Wed, 10 May 2017 08:55:49 -0500

Convert MAF file format http://last.cbrc.jp/doc/maf-convert.html #MAF #Convert #Format

Jit — Thu, 02 Mar 2017 10:54:53 -0600

Convert a SAM file to tab-delimited alignment coordinates https://gist.github.com/sjackman/7016520 #SAM #BAM #Convert #Tab

Jit — Thu, 08 Dec 2016 04:59:53 -0600

MiraConvert http://manpages.ubuntu.com/manpages/xenial/man1/miraconvert.1.html #MIRA #Assembler #Convert