<![CDATA[BOL: Wire posts tagged with 'Genome']]> https://bioinformaticsonline.com/thewire/tag/Genome?offset=105 https://bioinformaticsonline.com/thewire/view/13942 Tue, 12 Aug 2014 15:29:51 -0500 https://bioinformaticsonline.com/thewire/view/13942 <![CDATA[Wire post by Jitendra Narayan]]> MafFilter: a highly flexible and extensible multiple genome alignment files processor http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3904536/ #MultipleGenomeAlignment #MAF #Genome #Alignment

]]> Jitendra Narayan https://bioinformaticsonline.com/thewire/view/13404 Sun, 03 Aug 2014 15:55:10 -0500 https://bioinformaticsonline.com/thewire/view/13404 <![CDATA[Wire post by Pragati Singh]]> transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences http://www.biomedcentral.com/1471-2105/6/156/ #Align #Genome

]]> Pragati Singh https://bioinformaticsonline.com/thewire/view/13268 Tue, 29 Jul 2014 09:45:15 -0500 https://bioinformaticsonline.com/thewire/view/13268 <![CDATA[Wire post by Jit]]> 114 different tools out there for DNA/RNA assembly https://twitter.com/kbradnam/status/479039027249971201/photo/1 #Assembly #Genome #Tools

]]> Jit https://bioinformaticsonline.com/thewire/view/12329 Wed, 25 Jun 2014 07:56:29 -0500 https://bioinformaticsonline.com/thewire/view/12329 <![CDATA[Wire post by Rahul Agarwal]]> http://www.mousephenotype.org/ #Mouse #Genome #Mammmals #GenesCatalogue

]]> Rahul Agarwal https://bioinformaticsonline.com/thewire/view/12260 Tue, 24 Jun 2014 05:52:16 -0500 https://bioinformaticsonline.com/thewire/view/12260 <![CDATA[Wire post by Rahul Agarwal]]> Multiple Genome Rearrangements and Ancestors ! https://github.com/ablab/mgra/ #genome #ancestor #phylogeny

]]> Rahul Agarwal https://bioinformaticsonline.com/thewire/view/12248 Tue, 24 Jun 2014 05:43:44 -0500 https://bioinformaticsonline.com/thewire/view/12248 <![CDATA[Wire post by Rahul Agarwal]]> Integrated Genome Browser ! https://bitbucket.org/lorainelab/integrated-genome-browser #genome #Viz

]]> Rahul Agarwal https://bioinformaticsonline.com/thewire/view/12246 Tue, 24 Jun 2014 05:42:49 -0500 https://bioinformaticsonline.com/thewire/view/12246 <![CDATA[Wire post by Rahul Agarwal]]> SPAdes Genome Assembler! http://bioinf.spbau.ru/en/spades #Genome #Assembler #Omics #NGS

]]> Rahul Agarwal https://bioinformaticsonline.com/thewire/view/11321 Sat, 31 May 2014 17:19:17 -0500 https://bioinformaticsonline.com/thewire/view/11321 <![CDATA[Wire post by John Parker]]> Bacterial genome assembly tips using Valvet http://pathogenomics.bham.ac.uk/blog/2009/09/tips-for-de-novo-bacterial-genome-assembly/ #Assembly #NGS #Bacteria #Genome #Tricks #Tips #Velvet

]]> John Parker https://bioinformaticsonline.com/thewire/view/9306 Mon, 17 Mar 2014 16:33:22 -0500 https://bioinformaticsonline.com/thewire/view/9306 <![CDATA[Wire post by Rahul Nayak]]> Download the human genome hg19 wget --timestamping 'ftp://hgdownload.cse.ucsc.edu/goldenPath/hg19/chromosomes/chr*.fa.gz' #Human #Genome #Download #UCSC

]]> Rahul Nayak https://bioinformaticsonline.com/thewire/view/4720 Mon, 23 Sep 2013 06:50:05 -0500 https://bioinformaticsonline.com/thewire/view/4720 <![CDATA[Wire post by Archana Malhotra]]> Installing a minimal UCSC genome browser mirror in Ubuntu 10.04 64 bits http://goo.gl/PWHxDd #UCSC #Genome

]]> Archana Malhotra