BOL: Wire posts tagged with 'Genome'

Wire post by Rahul Agarwal

Rahul Agarwal — Sat, 25 Jan 2020 14:08:47 -0600

https://www.biorxiv.org/content/10.1101/2020.01.22.914952v2.full.pdf+html #coronavirus #bat #genome

Wire post by Jit

Jit — Thu, 05 Dec 2019 05:50:39 -0600

#BlobToolKit can be used during #assembly to filter non-target DNA, helping researchers produce assemblies with high biological credibility. https://blobtoolkit.genomehubs.org/view #Genome #Blob #Con

Wire post by Rahul Nayak

Rahul Nayak — Sun, 24 Nov 2019 20:28:53 -0600

Graph reference genome https://vimeo.com/184983995 #Graph #Reference #Genome #GraphRef

Wire post by Abhimanyu Singh

Abhimanyu Singh — Thu, 06 Jun 2019 08:33:06 -0500

Simple script to generate whole-genome coverage plots https://github.com/matted/genome_coverage_plotter #Coverage #Plot #Genome

Wire post by Abhimanyu Singh

Abhimanyu Singh — Sun, 07 Apr 2019 22:02:41 -0500

A quick #guide for student-driven community #genome #annotation https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1006682

Wire post by Abhimanyu Singh

Abhimanyu Singh — Sun, 31 Mar 2019 20:58:06 -0500

Using R: #plotting the #genome on a line https://www.r-bloggers.com/using-r-plotting-the-genome-on-a-line/ . #plot #R

Wire post by Jit

Jit — Sun, 24 Feb 2019 17:45:06 -0600

Human genome reads http://www.bcgsc.ca/downloads/btl/ntedit/paper/human/ #human #genome #reads #data

Wire post by Rahul Nayak

Rahul Nayak — Thu, 21 Feb 2019 10:20:30 -0600

NGS Exercise.4 https://wiki.bits.vib.be/index.php/NGS_Exercise.4 #Exercise #Learn #Plot #Circos #Genome #NGS #Tutorial

Wire post by Rahul Nayak

Rahul Nayak — Thu, 21 Feb 2019 10:17:22 -0600

De novo genome assembly https://astrobiomike.github.io/genomics/de_novo_assembly #Genome #Assembly #DeNovo #Genome

Wire post by Jit

Jit — Fri, 08 Feb 2019 07:34:24 -0600

Machine learning meets genome assembly https://academic.oup.com/bib/advance-article-abstract/doi/10.1093/bib/bby072/5074612 #genome #assembly #machine #learning

Wire post by Jit

Jit — Mon, 04 Feb 2019 13:26:13 -0600

samtools mpileup -uf reference.nt mapping.bam | bcftools call -c | vcfutils.pl vcf2fq > consensus.fasta #Genome #Assembly #Reference

Wire post by BioStar

BioStar — Fri, 01 Feb 2019 09:01:02 -0600

The aim of this program suite is to support checks of #Sequence #Variant #Nomenclature according to the guidelines of the #Human #Genome #Variation Society. https://www.mutalyzer.nl/

Wire post by Jit

Jit — Thu, 31 Jan 2019 06:48:22 -0600

Genome Information by Organism https://www.ncbi.nlm.nih.gov/genome/browse/#!/overview/ #Genome #information #NCBI

Wire post by Jit

Jit — Tue, 08 Jan 2019 14:20:34 -0600

I recommend two technologies: long reads to get the genome right, short reads to get the bases right. #Genome #Assembly #Reads #LonfReads

Wire post by Rahul Nayak

Rahul Nayak — Mon, 07 Jan 2019 08:45:39 -0600

Long reads assembly tutorial https://www.melbournebioinformatics.org.au/tutorials/tutorials/pacbio/ #Long #Reads #PacBio #assembly #Genome