<![CDATA[BOL: Wire posts tagged with 'Genome']]> https://bioinformaticsonline.com/thewire/tag/Genome?offset=90 https://bioinformaticsonline.com/thewire/view/18142 Sat, 11 Oct 2014 11:55:19 -0500 https://bioinformaticsonline.com/thewire/view/18142 <![CDATA[Wire post by Rahul Agarwal]]> Genome Assembly & Analysis Tool Box (GATB)!! http://gatb.inria.fr/ #genome #assembly

]]> Rahul Agarwal https://bioinformaticsonline.com/thewire/view/18077 Fri, 10 Oct 2014 16:02:50 -0500 https://bioinformaticsonline.com/thewire/view/18077 <![CDATA[Wire post by Jit]]> Genome assembly algorithms http://www.nature.com/subjects/genome-assembly-algorithms #NGS #Assembly #Algorithms #Genome #Tools

]]> Jit https://bioinformaticsonline.com/thewire/view/17853 Fri, 03 Oct 2014 16:38:59 -0500 https://bioinformaticsonline.com/thewire/view/17853 <![CDATA[Wire post by Jitendra Narayan]]> A perl tool to conveniently parse RepeatMasker output files http://www.mobilednajournal.com/content/5/1/13 #Perl #Repeat #Transposable #NGS #Genome #TEs #Mobile

]]> Jitendra Narayan https://bioinformaticsonline.com/thewire/view/17837 Fri, 03 Oct 2014 07:58:20 -0500 https://bioinformaticsonline.com/thewire/view/17837 <![CDATA[Wire post by Rahul Agarwal]]> Canola genome- 101,000 genes !http://www.sciencemag.org/content/345/6199/950.abstract #Seq #Genome

]]> Rahul Agarwal https://bioinformaticsonline.com/thewire/view/16672 Mon, 15 Sep 2014 17:07:51 -0500 https://bioinformaticsonline.com/thewire/view/16672 <![CDATA[Wire post by Jitendra Narayan]]> SAGE: String-overlap Assembly of GEnomes http://www.biomedcentral.com/1471-2105/15/302/abstract #Genome #SAGE #Assembly

]]> Jitendra Narayan https://bioinformaticsonline.com/thewire/view/16656 Mon, 15 Sep 2014 15:41:45 -0500 https://bioinformaticsonline.com/thewire/view/16656 <![CDATA[Wire post by Jitendra Narayan]]> CYNTENATOR: Progressive Gene Order Alignment of 17 Vertebrate Genomes http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0008861#pone-0008861-g003 #Alignment #CYNTENATOR #Genome

]]> Jitendra Narayan https://bioinformaticsonline.com/thewire/view/14881 Wed, 03 Sep 2014 17:57:46 -0500 https://bioinformaticsonline.com/thewire/view/14881 <![CDATA[Wire post by Jitendra Narayan]]> Genome alignment with graph data structures: a comparison http://www.biomedcentral.com/1471-2105/15/99 #Genome #Alignment #Data #Graph

]]> Jitendra Narayan https://bioinformaticsonline.com/thewire/view/14878 Wed, 03 Sep 2014 17:56:54 -0500 https://bioinformaticsonline.com/thewire/view/14878 <![CDATA[Wire post by Jitendra Narayan]]> Ragout—a reference-assisted assembly tool for bacterial genomes http://bioinformatics.oxfordjournals.org/content/30/12/i302.short #Genome #Assembly #Reference #Ragout #Bacteria

]]> Jitendra Narayan https://bioinformaticsonline.com/thewire/view/14871 Wed, 03 Sep 2014 16:03:55 -0500 https://bioinformaticsonline.com/thewire/view/14871 <![CDATA[Wire post by Jitendra Narayan]]> ECR Browser: a tool for visualizing and accessing data from comparisons of multiple vertebrate genomes http://nar.oxfordjournals.org/content/32/suppl_2/W280.short #Browser #Visualization #Genome #Synt

]]> Jitendra Narayan https://bioinformaticsonline.com/thewire/view/14334 Sun, 24 Aug 2014 06:17:20 -0500 https://bioinformaticsonline.com/thewire/view/14334 <![CDATA[Wire post by Jitendra Narayan]]> Genomics England are set to sequence the genomes of 100,000 Brits over the next five years. www.genomicsengland.co.uk #Genome #England #Sequencing #Brit

]]> Jitendra Narayan https://bioinformaticsonline.com/thewire/view/14299 Sat, 23 Aug 2014 04:16:31 -0500 https://bioinformaticsonline.com/thewire/view/14299 <![CDATA[Wire post by Poonam Mahapatra]]> 1000genomes http://www.1000genomes.org/category/phenotype #1000Genome #Data #Genome

]]> Poonam Mahapatra https://bioinformaticsonline.com/thewire/view/14006 Wed, 13 Aug 2014 15:59:02 -0500 https://bioinformaticsonline.com/thewire/view/14006 <![CDATA[Wire post by Jitendra Narayan]]> Professor David Porteous explains that breakpoints in the genome http://www.dnalc.org/view/1241-Breakpoints.html #Breakpoint #Genome #Chromosome

]]> Jitendra Narayan https://bioinformaticsonline.com/thewire/view/13952 Tue, 12 Aug 2014 16:40:53 -0500 https://bioinformaticsonline.com/thewire/view/13952 <![CDATA[Wire post by John Parker]]> Genome data mining for everyone http://www.bmbreports.org/fulltext/bmbreports/view.php?vol=41&page=757 #Report #Genome #Research #BMC

]]> John Parker https://bioinformaticsonline.com/thewire/view/13950 Tue, 12 Aug 2014 16:37:46 -0500 https://bioinformaticsonline.com/thewire/view/13950 <![CDATA[Wire post by John Parker]]> galign: A Tool for Rapid Genome Polymorphism Discovery http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2746318/ #SNP #Variation #galign #Genome

]]> John Parker https://bioinformaticsonline.com/thewire/view/13948 Tue, 12 Aug 2014 16:32:40 -0500 https://bioinformaticsonline.com/thewire/view/13948 <![CDATA[Wire post by John Parker]]> Validated whole genome structural variation detection using multiple callers http://bcbio.wordpress.com/ #VariationCalling #Genome #SNP

]]> John Parker