BOL: Wire posts tagged with 'Linux'

Wire post by Jit

Jit — Fri, 30 Mar 2018 08:12:23 -0500

Glob multiple files in Linux with Perl. my @soundfiles = grep {/\.(wav|mid|mp3|rm|ogg)$/i} glob("*"); #Perl #Linux #Glob

Surabhi Chaudhary — Sun, 03 Dec 2017 17:47:00 -0600

Remove the unwanted characters from Fasta file: sed -e '/^[^>]/s/[^ATGCatgc]/N/g' infile.fa #sed #unwanted #illegal #remove #correct #fasta #linux

Jit — Wed, 29 Nov 2017 04:46:18 -0600

Linux command to find the file contains a string "LOCK_EX": grep -Ril "LOCK_EX" / #Root #Find #Linux #Grep #search

Jit — Wed, 05 Jul 2017 11:02:44 -0500

Split the file in Linux with size. $ split --bytes=50M aaaa.fa #split #linux #size

Rahul Nayak — Fri, 30 Jun 2017 04:12:21 -0500

You can use the df command to know the free space in the disk: $ df -h . #df #Linux #List #Free #Space

Rahul Nayak — Fri, 30 Jun 2017 04:11:21 -0500

To know the size of the directory in current folder. $ du -sh * #Size #Directory #List #Space #Linux #du

Jit — Tue, 30 May 2017 05:17:21 -0500

Filter #blank #lines from a #fasta file using sed. $ sed '/^$/d' finalSample.fa > finalSample_filtered.fa #Linux #Filter #FASTA #SED

Abhimanyu Singh — Tue, 02 May 2017 11:31:32 -0500

Show before(B) and after(A) the matching region $ grep -B 3 -A 2 foo README.txt #Linux #Tricks #View #Grep

Hardeep Kaur — Fri, 17 Mar 2017 19:21:19 -0500

Open exFAT drive on Linux. $ sudo apt-get install exfat-fuse exfat-utils #Linux #exFAT

Jit — Mon, 13 Mar 2017 11:46:36 -0500

#Remove all line that start with # file: $ sed '/^#/ d' filename #line #sed #linux

Jit — Tue, 07 Mar 2017 08:33:49 -0600

Add color to vim. Open vi .vimrc and at the end of the file add "syntax on" #Vim #Syntax #Highlight #Vi #Linux

Abhimanyu Singh — Mon, 06 Mar 2017 10:16:38 -0600

To generate ssh folder in linux $ ssh-keygen #Linux #ssh #Key #Connect

Abhimanyu Singh — Mon, 06 Mar 2017 05:36:42 -0600

sudo apt-get install libgd-svg-perl to install GD::SVG #Perl #Linux #Install #Graph #Plot

Jit — Mon, 20 Feb 2017 09:45:58 -0600

Find the DIRs in Linux: $ find / -name "DIR_NAME" #Linux #Find #DIR

Jit — Thu, 16 Feb 2017 17:49:16 -0600

#Upgrade the current version of #Linux. $ sudo apt-get update && sudo apt-get upgrade