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	<title><![CDATA[BOL: Wire posts tagged with 'Pipeline']]></title>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/thewire/view/43317</guid>
	<pubDate>Thu, 26 Aug 2021 10:21:48 -0500</pubDate>
	<link>https://bioinformaticsonline.com/thewire/view/43317</link>
	<title><![CDATA[Wire post by Neel]]></title>
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<p>#RepExpress: A Novel #Pipeline for the Quantification and Characterization of #Transposable #Element #Expression from RNA-seq Data https://pubmed.ncbi.nlm.nih.gov/34387946/</p>
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	<dc:creator>Neel</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/thewire/view/39051</guid>
	<pubDate>Sat, 02 Mar 2019 18:23:51 -0600</pubDate>
	<link>https://bioinformaticsonline.com/thewire/view/39051</link>
	<title><![CDATA[Wire post by Rahul Nayak]]></title>
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<p>Script of scripts: A pragmatic workflow system for daily computational research https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1006843 #SoS #Script #Analysis #Tools #Pipeline</p>
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	<dc:creator>Rahul Nayak</dc:creator>
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	<pubDate>Sat, 19 Jan 2019 17:22:51 -0600</pubDate>
	<link>https://bioinformaticsonline.com/thewire/view/38733</link>
	<title><![CDATA[Wire post by Jit]]></title>
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<p>Genome assembly tutorial  https://bioinformaticsdotca.github.io/high-throughput_biology_2017_module6_lab #tutorial #assembly #tools #steps #pipeline</p>
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	<dc:creator>Jit</dc:creator>
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	<pubDate>Thu, 16 Mar 2017 05:00:36 -0500</pubDate>
	<link>https://bioinformaticsonline.com/thewire/view/31579</link>
	<title><![CDATA[Wire post by Jit]]></title>
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<p>Pacbio pipeline http://www.cbcb.umd.edu/software/PBcR/ #Pacbio #Reads #Pipeline</p>
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	<dc:creator>Jit</dc:creator>
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	<pubDate>Tue, 05 Apr 2016 08:46:42 -0500</pubDate>
	<link>https://bioinformaticsonline.com/thewire/view/26885</link>
	<title><![CDATA[Wire post by Abhi]]></title>
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<p>Annotation transfer pipeline MAKER http://gmod.org/wiki/MAKER_Tutorial_2013 #Maker #Annotation #Pipeline</p>
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	<dc:creator>Abhi</dc:creator>
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	<pubDate>Wed, 17 Feb 2016 15:59:24 -0600</pubDate>
	<link>https://bioinformaticsonline.com/thewire/view/26403</link>
	<title><![CDATA[Wire post by Rahul Nayak]]></title>
	<description><![CDATA[
<p>http://blogs.sciencemag.org/pipeline/archives/2016/02/16/thoughts-on-sci-hub #Science #Pipeline</p>
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	<dc:creator>Rahul Nayak</dc:creator>
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	<pubDate>Sun, 29 Nov 2015 03:52:55 -0600</pubDate>
	<link>https://bioinformaticsonline.com/thewire/view/25312</link>
	<title><![CDATA[Wire post by Nishi Singh]]></title>
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<p>#Eukaryotic #genome #annotation http://www.webscipio.org/help/scipio #scipio #pipeline</p>
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	<dc:creator>Nishi Singh</dc:creator>
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	<pubDate>Fri, 16 Jan 2015 13:06:34 -0600</pubDate>
	<link>https://bioinformaticsonline.com/thewire/view/20423</link>
	<title><![CDATA[Wire post by Rahul Nayak]]></title>
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<p>Consensus assembly and allele interpretation pipeline.  https://github.com/nmdp-bioinformatics/pipeline #Pipeline #Bioinformatics #Assembly</p>
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	<dc:creator>Rahul Nayak</dc:creator>
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	<pubDate>Mon, 15 Sep 2014 17:19:44 -0500</pubDate>
	<link>https://bioinformaticsonline.com/thewire/view/16680</link>
	<title><![CDATA[Wire post by Robert M Willioms]]></title>
	<description><![CDATA[
<p>VirVarSeq: a low frequency Virus Variant detection pipeline http://bioinformatics.oxfordjournals.org/content/early/2014/08/31/bioinformatics.btu587.abstract #Pipeline #Variant #VirVarSeq</p>
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	<dc:creator>Robert M Willioms</dc:creator>
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	<pubDate>Fri, 06 Jun 2014 15:39:52 -0500</pubDate>
	<link>https://bioinformaticsonline.com/thewire/view/11577</link>
	<title><![CDATA[Wire post by John Parker]]></title>
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<p>NGS analysis pipeline http://www.egr.msu.edu/changroup/Protocols/NGS%20analysis%20example%20of%20a%20pipeline.html #Pipeline #NGS #Genomics #Tutorial</p>
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	<dc:creator>John Parker</dc:creator>
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