<![CDATA[BOL: Wire posts tagged with 'Synteny']]> https://bioinformaticsonline.com/thewire/tag/Synteny? https://bioinformaticsonline.com/thewire/view/42230 Thu, 22 Oct 2020 05:04:19 -0500 https://bioinformaticsonline.com/thewire/view/42230 <![CDATA[Wire post by BioStar]]> Synteny database resources synteny_blocks_bed at ftp://cegg.unige.ch/CEGA/synteny_blocks_bed/ @
#Synteny #Database

]]> BioStar https://bioinformaticsonline.com/thewire/view/41580 Fri, 24 Apr 2020 07:58:06 -0500 https://bioinformaticsonline.com/thewire/view/41580 <![CDATA[Wire post by Neel]]> Deeply conserved synteny resolves early events in vertebrate evolution https://www.nature.com/articles/s41559-020-1156-z #Synteny #Evolution #Vertebrate

]]> Neel https://bioinformaticsonline.com/thewire/view/39751 Sat, 03 Aug 2019 20:26:23 -0500 https://bioinformaticsonline.com/thewire/view/39751 <![CDATA[Wire post by Jit]]> #SynCircos draws the interactive #Circos plot by using selected species and chromosomes.
http://bioinfo.konkuk.ac.kr/GMASS/htdocs/syncircos.php #Synteny

]]> Jit https://bioinformaticsonline.com/thewire/view/36105 Fri, 06 Apr 2018 08:07:56 -0500 https://bioinformaticsonline.com/thewire/view/36105 <![CDATA[Wire post by Jit]]> https://www.r-graph-gallery.com/323-sankey-diagram-with-the-networkd3-library/ #R #Sankey #Diagram #Draw #Connect #Synteny

]]> Jit https://bioinformaticsonline.com/thewire/view/35020 Mon, 01 Jan 2018 19:22:53 -0600 https://bioinformaticsonline.com/thewire/view/35020 <![CDATA[Wire post by Jit]]> Definition of homologous #synteny blocks http://science.sciencemag.org/content/sci/suppl/2005/07/20/309.5734.613.DC1/Murphy.SOM.pdf

]]> Jit https://bioinformaticsonline.com/thewire/view/32615 Wed, 10 May 2017 09:24:17 -0500 https://bioinformaticsonline.com/thewire/view/32615 <![CDATA[Wire post by Jit]]> MAF2Synteny https://github.com/fenderglass/maf2synteny #Convert #Synteny #MAF #Ragout

]]> Jit https://bioinformaticsonline.com/thewire/view/30165 Fri, 16 Dec 2016 10:49:27 -0600 https://bioinformaticsonline.com/thewire/view/30165 <![CDATA[Wire post by Jit]]> Synteny database https://ecrbase.dcode.org/synteny.php #Synteny #Database

]]> Jit https://bioinformaticsonline.com/thewire/view/26887 Tue, 05 Apr 2016 09:56:36 -0500 https://bioinformaticsonline.com/thewire/view/26887 <![CDATA[Wire post by Abhi]]> A universal genomic #coordinate translator for comparative genomics https://github.com/nedaz/kraken #Genes #Translator #Synteny

]]> Abhi https://bioinformaticsonline.com/thewire/view/26246 Mon, 01 Feb 2016 09:32:25 -0600 https://bioinformaticsonline.com/thewire/view/26246 <![CDATA[Wire post by Jitendra Narayan]]> A Multiscale Synteny Browser tool MizBee http://www.cs.utah.edu/~miriah/mizbee/Overview.html #Synteny #Browser #Genome #NGS #ComparativeGenomics

]]> Jitendra Narayan https://bioinformaticsonline.com/thewire/view/17909 Sun, 05 Oct 2014 20:32:57 -0500 https://bioinformaticsonline.com/thewire/view/17909 <![CDATA[Wire post by Jitendra Narayan]]> Orthology Detection Combining Clustering and Synteny for Very Large Datasets http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0105015 #Chromosome #Clustering #Synteny

]]> Jitendra Narayan https://bioinformaticsonline.com/thewire/view/17217 Sun, 21 Sep 2014 14:01:36 -0500 https://bioinformaticsonline.com/thewire/view/17217 <![CDATA[Wire post by John Parker]]> MAP2: multiple alignment of syntenic genomic sequences http://nar.oxfordjournals.org/content/33/1/162.full #Alignment #Synteny #Sequence

]]> John Parker https://bioinformaticsonline.com/thewire/view/14875 Wed, 03 Sep 2014 17:55:46 -0500 https://bioinformaticsonline.com/thewire/view/14875 <![CDATA[Wire post by Jitendra Narayan]]> Evaluating synteny for improved comparative studies http://bioinformatics.oxfordjournals.org/content/30/12/i9.short #Genomics #Synteny #ComparativeStudy

]]> Jitendra Narayan https://bioinformaticsonline.com/thewire/view/14365 Mon, 25 Aug 2014 06:43:28 -0500 https://bioinformaticsonline.com/thewire/view/14365 <![CDATA[Wire post by Jitendra Narayan]]> Mercator that constructs orthology maps between multiple whole genomes https://www.biostat.wisc.edu/~cdewey/mercator/ #Synteny #Orthology #Map #Construction #Alignment

]]> Jitendra Narayan