BOL: Wire posts tagged with 'reference'

Wire post by BioStar

BioStar — Thu, 20 Feb 2020 01:34:55 -0600

Perl References https://gist.github.com/afair/2402068 #Perl #Reference #Array #Hash

Wire post by Rahul Nayak

Rahul Nayak — Sun, 24 Nov 2019 20:28:53 -0600

Graph reference genome https://vimeo.com/184983995 #Graph #Reference #Genome #GraphRef

Wire post by Jit

Jit — Mon, 04 Feb 2019 13:26:13 -0600

samtools mpileup -uf reference.nt mapping.bam | bcftools call -c | vcfutils.pl vcf2fq > consensus.fasta #Genome #Assembly #Reference

Wire post by Jit

Jit — Sun, 13 Mar 2016 10:04:46 -0500

#Mapping #sequencing #reads to a #reference #genome with #Bowtie2: a step-by-step guide https://insidedna.me/tutorials/view/how-to-use-bowtie2-read-mapping

Wire post by Rahul Nayak

Rahul Nayak — Fri, 30 Jan 2015 02:02:19 -0600

Reference genomics http://www.foodqualitynews.com/Lab-Technology/Bioinformatics-platform-scoops-award #Genomics #Reference

Wire post by Jitendra Narayan

Jitendra Narayan — Mon, 15 Sep 2014 16:20:45 -0500

Reference-free Prediction of Rearrangement Breakpoint Reads http://bioinformatics.oxfordjournals.org/content/early/2014/05/28/bioinformatics.btu360.short #Reference #Breakpoint #Reads #Rearrangement

Wire post by Jitendra Narayan

Jitendra Narayan — Wed, 03 Sep 2014 17:56:54 -0500

Ragout—a reference-assisted assembly tool for bacterial genomes http://bioinformatics.oxfordjournals.org/content/30/12/i302.short #Genome #Assembly #Reference #Ragout #Bacteria