Results for "BBSplit"
Blogs
BBTools for bioinformatician !
...u'd want to only keep the paired output. BBSplit is based on BBMap, so it is a...BDuk and Seal (which can be used similarly to BBSplit) are always deterministic.&nb...----------------------------------------------BBSplit.shBBSplit now has the ability...2262 days ago
Top-level pages
BBSplit: Read Binning Tool for Metagenomes and Contaminated Libraries
BBSplit internally uses BBMap to map reads t...e ambiguous between human and mouse. BBSplit tracks this additional ambigu...mbig2” flag. The normal use of BBSplit is like Seal, either quantify...li and salmonella, you could do this:bbsplit.sh in=reads.fq ref=ecoli.fa,s...2306 days ago
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BBSplit: Read Binning Tool for Metagenomes and Contaminated Libraries
BBSplit internally uses BBMap to map reads to multiple genomes at once, and determine which genome they match best. This is different than with ordinary mapping. If a genome (say, human) contains an exact repeat somewhere, reads mapping to it will be mapped ambiguously. But if you want to determi...Tags: BBSplit, Read, Binning, Tool, Metagenomes, Contaminated, Libraries
2306 days ago
