BOL

AI + Bioinformatics = a smarter future for biology. From decoding genes to accelerating discoveries, the possibilities are endless! #Bioinformatics #AI https://www.youtube.com/watch?v=U0aToL5C-bQ&t=21

Convert #GFF2BED (base) [b@hn1 DUMP]$ awk 'BEGIN {OFS = "\t"};$3=="gene"{print $1,$4-1,$5}' genomic.gff > genes.bed

To #uninstall #phonelink in window run it in poweshell: Get-AppxPackage Microsoft.YourPhone -AllUsers | Remove-AppxPackage

Interesting plots https://www.machinelearningplus.com/plots/top-50-matplotlib-visualizations-the-master-plots-python/ #Plots #Idea

Prompt: GPT-4, Image Creation: Midjourney, Image Resolution Improvement: Magnific, Image to Video: Luma AI, Video Upscaling: TensorPix, Sound Effect Generation: OptimizerAI, Video Editing: CapCu

#NCBI is planning to push some updated on #taxonomy #classification https://ncbiinsights.ncbi.nlm.nih.gov/2024/06/04/changes-ncbi-taxonomy-classifications/

Dengue Virus Genome https://www.ncbi.nlm.nih.gov/genomes/GenomesGroup.cgi?taxid=12637 #Dengue

Use a Python Package to Access the RCSB #PDB Search API https://www.rcsb.org/news/feature/65a1acf5c76ca3abcc925d0b

Walk-in Bioinformatics interview @ https://cdri.res.in/pdf/recruitment/Advt_01_2024_Project_Staff.pdf

MultiQC: A fresh coat of paint https://seqera.io/blog/multiqc-plotly/ #MultiQC #Updates

#Multi-line fasta to #Single-line Fasta $ awk '/^>/ {if (NR>1) print ""; printf("%s\n", $0); next; } { printf("%s", $0) } END { printf("\n"); }' multi_line.fasta > single_line.fasta

Delete all the headers from multifasta file $ awk 'BEGIN {print ">"ARGV[1]};!/^>/{print}' test.fa #fasta #delete #header #multifasta

Data resource for metagenomics benchmarking https://ftp.ebi.ac.uk/pub/databases/metagenomics/taxon_benchmarking/ #Tools #Metagenome

#Learning and understanding #ANOVA online https://sphweb.bumc.bu.edu/otlt/mph-modules/bs/bs704_hypothesistesting-anova/bs704_hypothesistesting-anova_print.html

Interesting online plots idea https://chart-studio.plotly.com/create/#/ #Plots #Idea #Shiny #Draw