Results for "analysis"
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The blog is a collection of script examples with example data and output plots. R produce excellent quality graphs for data analysis, science and business presentation, publications and other purposes. Self-help codes and examples are provided. Enjoy nice graphs !!Tags: Bioinformatics, Analysis, NGS, R, Graph, Plot, Stats
2729 days ago
- Topics Displaying and describing data Modeling distributions of data Describing relationships in quantitative data Designing studies Probability Random variables Sampling distributions Confidence intervals (one sample) Significance tests (one sample) Significance tests and confidence ...
Tags: Bioinformatics, Analysis, Statistics, Probability
2726 days ago
Bookmarks Biostatistics materials and books
Biostatistics did not spring fully formed from the brow of R. A. Fisher, but evolved over many years. This process is continuing, although it may not be obvious from the outside. It has been ten years since the first edition of this book appeared (and rather longer since it was begun). Over this ...Tags: Bioinformatics, Analysis, Biostatistics, Books, Materials
2726 days ago
Method in Comparative genomics !!
We present methods for the automatic determination of genome correspondence. The algorithms enabled the automatic identification of orthologs for more than 90% of genes and intergenic regions across the four species despite the large number of duplicated genes in the yeast genome. The remaining a...Tags: Bioinformatics, Comparative genomics, Genomics, Chromosome, Analysis, Method, Evolution
2724 days ago
- One of our primary focuses will be to develop an understanding of the various ways in which we can assign a probability to some chance event. We'll also learn the fundamental properties of probability, investigate how probability behaves, and learn how to calculate the probability of a ...
Tags: Bioinformatics, Analysis, Biostatistics, Books, Materials
2724 days ago
- Background. Next-generation sequencing technologies are now producing multiple times the genome size in total reads from a single experiment. This is enough information to reconstruct at least some of the differences between the individual genome studied in the experiment and the reference genome...
Tags: Bioinformatics, Analysis, Assembly, Genome, Reference, NGS, RECORD
2709 days ago
- GoJS is a feature-rich JavaScript library for implementing custom interactive diagrams and complex visualizations across modern web browsers and platforms. GoJS makes constructing JavaScript diagrams of complex nodes, links, and groups easy with customizable templates and layouts. GoJS offers ma...
Tags: Bioinformatics, Analysis, Graph, JavaScript, GoJS, Plot, HTML
2712 days ago
- Spines is a collection of software tools, developed and used by the Vertebrate Genome Biology Group at the Broad Institute. It provides basic data structures for efficient data manipulation (mostly genomic sequences, alignments, variation etc.), as well as specialized tool sets for various a...
Tags: Bioinformatics, Analysis, Alignment, Synteny, Spines
2706 days ago
- EXCAVATOR2 is a collection of bash, R and Fortran scripts and codes that analyses Whole Exome Sequencing (WES) data to identify CNVs. EXCAVATOR2 enhances the identification of all genomic CNVs, both overlapping and non-overlapping targeted exons by integrating the analysis of In-targets and Off- ...
Tags: Bioinformatics, Analysis, CNV, EXCAVATOR2, tool, NGS
2704 days ago
e-RGA: enhanced Reference Guided Assembly of Complex Genomes
Next Generation Sequencing has totally changed genomics: we are able to produce huge amounts of data at an incredibly low cost compared to Sanger sequencing. Despite this, some old problems have become even more difficult, de novo assembly being on top of this list. Despite efforts to design tool...Tags: Bioinformatics, Analysis, NGS, e-RGA, Genome, Assemble
2685 days ago
