BOL: Question: How to remove a fasta sequence by header from a multifasta file ?

Question: Question: How to remove a fasta sequence by header from a multifasta file ?

Archana Malhotra
2570 days ago

Question: How to remove a fasta sequence by header from a multifasta file ?

>AAA
AGTCGTGC

>BBB
AGTGCGGGTG

Remove AAA and keep only BBB

Answers

Try BBMAP

filterbyname.sh in=file.fa out=filtered.fa names=contig1,contig2

Jit 2570 days ago