Rahul Agarwal
I'm a Bioinformatician and Programmer
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UpSetR Shiny App!
By Jit 3363 days agogehlenborglab.shinyapps.io - UpSetR generates static UpSet plots. The UpSet technique visualizes set intersections in a matrix layout and introduces aggregates based on groupings and queries. The matrix layout enables the effective representation of associated data, such...The Upton (VBRC) lab
This Bioinformatics Resource (Virology.ca, the Canadian half of the now defunct VBRC) focuses on large DNA viruses: Poxviruses African Swine Fever Viruses Iridoviruses Baculoviruses Research Area Custom searches of the viral...DBG2OLC:Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation...
By Jit 3357 days ago Comments (1)github.com - DBG2OLC:Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing Technologies Our work is published in Scientific Reports: Ye, C. et al. DBG2OLC: Efficient Assembly of Large Genomes Using Long Erroneous...Welch Lab
They are based in the Department of Genetics at the University of Cambridge. The research covers diverse areas of evolutionary biology, and molecular evolution in particular. It combines theoretical and empirical approaches, and particularly...Enrichr: a comprehensive gene set enrichment analysis
By Jit 3350 days agoamp.pharm.mssm.edu - Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present a significant update to one of the tools in this domain called Enrichr. Enrichr currently contains a large collection of diverse...List of popular bioinformatics software/tools
By Jitendra Narayan 4730 days ago Comments (28)samtools.sourceforge.net - In current genome era, our day to day work is to handle the huge geneome sequences, expression data, several other datasets. This link provide a comprehensive list of commonly used sofware/tools.SSPACE
By Jit 3342 days agowww.baseclear.com - SSPACE standard is a stand-alone program for scaffolding pre-assembled contigs using NGS paired-read data. It is unique in offering the possibility to manually control the scaffolding process. By using the distance information of paired-end and/or...Computational Proteomics : Lets remember the basics
By Jitendra Narayan 4714 days ago Comments (5)Basics of computational proteomicsTen International Scholarships for Indian Biotechnology and Bioinformatics Students
By Priya Singh 3337 days ago Comments (10)10 International Scholarships for Indian StudentsLife of BI !!!
By Jitendra Narayan 4693 days ago Comments (1)Hmm .. Don't worry you read it right .. this is not pi but bi ... "life of Bioinformatician(BI)". Disclaimer: This cartoon is solely designed to create humour and fun, not to offend any PI, supervisor or student.
