RNA-Seq De novo Assembly Using Trinity
...-length splicing isoforms and to tease apart transcripts derived from paralogous genes. Briefly, the process w...y spliced isoforms, and teasing apart transcripts that corresponds to paralogous genes. More at https://g...3017 days ago
2522 days ago
Genomicus: genome browser that enables users to navigate in genomes in several dimensions
...time. Once a query gene has been entered, it is displayed in its genomic context in parallel to the genomic context of all its orthologous and paralogous copies in all the other seque...2411 days ago
SDA: Long-read sequence and assembly of segmental duplications
Segmental Duplication Assembler (SDA; https://github.com/mvollger/SDA) constructs graphs in which paralogous sequence variants define the nodes and long-read sequences provide attractio...1939 days ago
Mercator: Multiple Whole-Genome Orthology Map Construction
...999) and thus we will use the terms "homologous", "orthologous", and "paralogous" instead. Ideally, given K ge...we would like to identify all orthologous genomic regions as well as paralogous regions within each genome an...1498 days ago
Genomicus: genome browser that enables users to navigate in genomes in several dimensions
...time. Once a query gene has been entered, it is displayed in its genomic context in parallel to the genomic context of all its orthologous and paralogous copies in all the other seque...848 days ago