2827 days ago
OPERA : Optimal Paired-End Read Assembler
...nt for scaffolding large genomes (multi-library support, better repeat-handling etc.), in addition to other scalability and usability improvements (bam and gzip support, smaller mem...2823 days ago
2781 days ago
2655 days ago
splitbam: splits a BAM by chromosomes
splitbam splits a BAM by chromosomes. Using the referenc...*.dict), it also creates some empty BAM files if no sam record was fo...ds can also be added to those empty BAMs to avoid some tools (like sa...pped -e | --empty : generate EMPTY bams for chromosome having no rea...2651 days ago
SeqMule: Automated human exome/genome variants detection
SeqMule takes single-end or paird-end FASTQ or BAM files, generates a script consisting of more than 10 popular alignment, analysis tools and runs the script line by line. Users can...2644 days ago
2636 days ago
2534 days ago
Biological file format tutorial
...sh the difference between different formats. Please refer user manual or other information resources on web for more details. FASTA FASTQ SAM BAM VCF GFF GTF...2359 days ago
Alfred: BAM Statistics and Feature Counting
The easiest way to get Alfred is to download a statically linked binary from the Alfred github release page. Alternatively, you can build Alfred from source. Alf...2322 days ago