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DIYA: a bacterial annotation pipeline for any genomics lab
DIY Genomics is an open source bioinformatics consortium intended to bring a collection of tools and libraries into the hands of small scale genomics labs for the process of sequence assembly and annotation. Projects include DIYA, MGAP, CRISPR, and DIYGV http://gmod.org/wiki/Diya2528 days ago
miniasm: very fast OLC-based de novo assembler for noisy long reads
Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It t...p;deprecated PacBio E. coli data set. ONT data are acquired from the Loman Lab. For a C. elegans ...2378 days ago
Frontend: Perl Web framework documentation - Andrej Sali Lab
The frontend is a set of Perl classes that displays the web interface, allowing a user to upload their input files, start a job, display a list of all jobs in the sys...2335 days ago
An Introduction to Applied Bioinformatics
IAB is primarily being developed by Greg Caporaso(GitH...b/Twitter: @gregcaporaso) in the Caporaso Lab at Northern Arizona...ing website and information on my research and lab on my lab website. &nbs...2283 days ago
2235 days ago
S-plot2: creates an interactive, two-dimensional heatmap of sequences
S-plot2 creates an interactive, two-dimensional heatmap capturing the similarities and..., novel coding regions, and laterally transferred elements. http://www.putonti-lab.com/uploads/4/5/3/0/45307835/...2073 days ago