Results for "Data Mining Algorithm"
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Fermi is a de novo assembler with a particular focus on assembling Illumina short seque...erlap-layout-consensus paradigm and uses the FM-DNA-index (FMD-index) as the key data stru...2852 days ago
- These tutorials are written for hundreds of bioinformaticians trying to cope with large volume of next-generation sequencing (NGS) data. NGS...
2856 days ago
- VALET is a pipeline for performing de novo validation of metagenomic assemblie...re the quality of different assemblies. For comparing multiple assemblies of the same data-sets...
2839 days ago
BLAST Ring Image Generator (BRIG)
BRIG is a free cross-platform (Windows/Mac/Unix) application that can display circular com...er of genomes, with a focus on handling genome assembly data....enomes, draft genomes or even raw, unassembled sequence data. BR...2831 days ago
- DECIPHER is a software toolset that can be used to maintain, analyze, and decipher large amounts of DNA sequence data. To...
2831 days ago
- Strudel is our graphical tool for visualizing genetic and physical maps of genomes for comparative purposes. The application aims to let the user examine their data at a...
2831 days ago
Nemo – A stochastic, individual-base, genetically explicit simulation platform
A recombination map has been added for all multi-locus traits. The map positio...Many adjustments have been made for refined control of the input of parameters and data outp...2830 days ago
- The accurate description and annotation of structural variants can be complex. This is...has altered from the reference sequence. Minimum interpretation is made of this data. One...
2830 days ago
- Development of cancer is driven by somatic alterations, including numer...ch can be applied to DNA copy number data o...ously pinpointed by the segmentation algorithm that was applied to obtain CN...breakpoint events. This easy-to-use algorithm, ‘GeneBreak’, is implemented...
2211 days ago
- The MIRO (the miRNA omics) pipeline is a flexible and powerful tool for the analysis...t RNA) expression using short-read deep sequencing data....on profiles and cluster reads using one of several algorithm. MIRO output is furthermore c...
2827 days ago
