Results for "Various bioinformatics software"
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The Sybil software package provides a primarily web-based front-end to comparative genome datasets warehoused in a chado relational database. It was developed by the bioinformatics dep...2839 days ago
GAGE : Genome Assembly Gold-standard Evaluation
GAGE is an evaluation of the very latest large-scale genome assembly algorithms. We have or...bake-off" as an attempt to produce a realistic assessment of genome assembly software in a rapidly changing field o...2839 days ago
- DECIPHER is a software toolset that can be used to maintain, analyze, and decipher large amount...al. Refer to the PDF documents below for instructions on how to use DECIPHER for various tasks.
2816 days ago
- The MIRO (the miRNA omics) pipeline is a flexible and powerful tool for the analysis of miR...s using one of several algorithm. MIRO output is furthermore compatible with software such as genome browsers and m...
2812 days ago
Entrez Direct: E-utilities on the UNIX Command Line
Entrez Direct (EDirect) is an advanced method for accessing the NCBI's suite of interconnec...ned in structured XML format. This can eliminate the need for writing custom software to answer ad hoc questions. Q...2797 days ago
- Background: Transcriptomics, metabolomics, metagenomics, and other various next-generation sequencing (-omics) fields...esults: We propose shinyheatmap: an advanced user-friendly heatmap software suite capable of efficiently...
2795 days ago
- Beagle is a software package that performs genotype calling, genotype phasing, imputation of ungenotyped markers, and identity-by-descent segment detection. Beagle version 4....
2789 days ago
- HybPiper was designed for targeted sequence capture, in which DNA sequencing libraries are enriched for gene regions of i...r phylogenetics. HybPiper is a suite of Python scripts that wrap and connect bioinfor...
2781 days ago
- Background. Next-generation sequencing technologies are now prod...experiment. Our approach applies de novo assembly software to experimental reads and so-...CORD on both simulated and real data. We made our software publicly available on sourcef...
2760 days ago
- Spines is a collection of software tools, developed and used by the Vertebrate Genome...equences, alignments, variation etc.), as well as specialized tool sets for various analyses. It also features thr...
2757 days ago
