Results for "big data"
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VALET is a pipeline for performing de novo validation of metagenomic...quality of different assemblies. For comparing multiple assemblies of the same data-sets, VALET also reports an o...2811 days ago
BLAST Ring Image Generator (BRIG)
BRIG is a free cross-platform (Windows/Mac/Unix) applica...of genomes, with a focus on handling genome assembly data. The application is available...mes, draft genomes or even raw, unassembled sequence data. BRIG also accepts SAM-forma...2803 days ago
- DECIPHER is a software toolset that can be used to maintain, analyze, and decipher large amounts of DNA sequence data. To install DECIPHER, see the...
2803 days ago
- Strudel is our graphical tool for visualizing genetic and physical maps of genomes for comparative purposes. The application aims to let the user examine their data at a variety of different lev...
2803 days ago
Nemo – A stochastic, individual-base, genetically explicit simulation platform
A recombination map has been added for all multi-locus traits. The ma...y adjustments have been made for refined control of the input of parameters and data output. See updates in the ma...2802 days ago
- The accurate description and annotation of structural variants can be complex. &nbs...ltered from the reference sequence. Minimum interpretation is made of this data. One variant event can c...
2802 days ago
- Development of cancer is driven by somatic alterations, including numerical and str...iated breaks by a genome-wide approach, which can be applied to DNA copy number data obtained by array-Comparative...
2183 days ago
- The MIRO (the miRNA omics) pipeline is a flexible and powerful tool for the analysi...miRNA (or more generall short RNA) expression using short-read deep sequencing data. In its present implementatio...
2799 days ago
- Metagenomics sequencing projects collect samples of DNA from uncharacterized enviro...g-read technologies. Phymm, a new classification approach for metagenomics data which uses interpolated Marko...
2793 days ago
Entrez Direct: E-utilities on the UNIX Command Line
Entrez Direct (EDirect) is an advanced method for accessing the NCBI's suite of interconnected databases (publication, sequence,...nt-driven function that simplifies the extraction of data from document summaries or ot...2784 days ago
