Results for "data mining"

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  • DECIPHER

    DECIPHER is a software toolset that can be used to maintain, analyze, and decipher large amounts of DNA sequence data....

    2792 days ago

  • Strudel

    Strudel is our graphical tool for visualizing genetic and physical maps of genomes for comparative purposes. The application aims to let the user examine their data a...

    2792 days ago

  • Nemo – A stochastic, individual-base, genetically explicit simulation platform

    A recombination map has been added for all multi-locus traits. The map positions (chromosomal) for n...y adjustments have been made for refined control of the input of parameters and data o...

    2791 days ago

  • COSMIC

    The accurate description and annotation of structural variants can be complex.  This is due to the different...ltered from the reference sequence. Minimum interpretation is made of this data....

    2791 days ago

  • GeneBreak: a tool to systematically identify genes recurrently affected by the genomic location of chromosomal CNA-associated breaks by a genome-wide approach

    Development of cancer is driven by somatic alterations, including numerical and structural chromosomal aberrations...iated breaks by a genome-wide approach, which can be applied to DNA copy number data o...

    2172 days ago

  • MIRO : miRNA omics

    The MIRO (the miRNA omics) pipeline is a flexible and powerful tool for the analysis of miRNA (or more generall short RNA) expression using short-read deep sequencing data....

    2788 days ago

  • PHYMMBL

    Metagenomics sequencing projects collect samples of DNA from uncharacterized environments that may contain hundred...g-read technologies. Phymm, a new classification approach for metagenomics data w...

    2782 days ago

  • Entrez Direct: E-utilities on the UNIX Command Line

    Entrez Direct (EDirect) is an advanced method for accessing the NCBI's suite of interconnected databases (publication, sequence,...t-driven function that simplifies the extraction of data f...

    2773 days ago

  • Shinyheatmap

    Background: Transcriptomics, metabolomics, metagenomics, and other va...nown for their production of large datasets. Visualizing such big data has posed technical challenge...depict high-dimensional numerical data as a colored grid of cells, e...e visualization of extremely large datase...

    2771 days ago

  • Beagle

    Beagle is a software package that performs genotype calling, genotype pha...has no effect in version 4.1. If your data contains nuclear families and...accurate haplotype phasing and missing data inference for whole genome as...ity-by-descent detection in population data....

    2765 days ago