Results for "data science"
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KisSplice is a software that enables to analyse RNA-seq data with or without a reference genome. It is an exact local transcriptome a...quantify each variant in each condition. It has been tested on Illumina dataset...2876 days ago
- RepeatModeler is a de-novo repeat family identification and modeling package. At the h...t boundaries and family relationships from sequence data. RepeatModeler assists in aut...g the runs of RECON and RepeatScout given a genomic databas...
2874 days ago
- Most variant calling pipelines result in files containing large quantities of variant...cf) is an increasingly popular format for this data. The format of these files an...eir content is discussed in the vignette ‘vcf data.&r...
2873 days ago
Sushi: An R/Bioconductor package for visualizing genomic data
Sushi: An R/Bioconductor package for visualizing genomic data2861 days ago
Comparative genomics educational material and papers bookmarks
Alignment of the porcine genome against seven other mammalian genomes (Supplementary Information) identified homologous synteny blocks (HSBs). Using porcine HSBs and st...2790 days ago
- Gene finding in eukaryotic genomes is notoriously difficult to automate. The task is to design a work flow with a...ge of species. GeneMark-ET is a gene prediction tool that incorporates RNA-Seq data in...
2008 days ago
- Before uploading a data file, check the samples gallery to make sure that your data format is compatible. Your file must be plain text. Your data va...
2859 days ago
- Fermi is a de novo assembler with a particular focus on assembling Illumina short sequence reads from a mamm...ayout-consensus paradigm and uses the FM-DNA-index (FMD-index) as the key data st...
2852 days ago
- These tutorials are written for hundreds of bioinformaticians trying to cope with large volume of next-generation sequencing (NGS) data. N...
2856 days ago
- VALET is a pipeline for performing de novo validation of metagenomic assemblies. VALET checks a num...quality of different assemblies. For comparing multiple assemblies of the same data-se...
2839 days ago
