Results for "Data Structure"

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  • Maq: Mapping and Assembly with Quality

    Maq stands for Mapping and Assembly with Quality It builds assembly by...sta). Better a bacterial genome. Download maq, maq-data and maqview at the downl...where calib-30.dat is contained in maq-data. Vi...

    2773 days ago

  • GoJS

    GoJS is a feature-rich JavaScript library for implementing custom interactive diagrams and complex visualizations...in-place text editing, tooltips, context menus, automatic layouts, templates, data bind...

    2773 days ago

  • RECORD

    Background. Next-generation sequencing technologies are now producing multiple times the genome size in total rea...ts implementation called RECORD. We evaluate RECORD on both simulated and real data. We...

    2770 days ago

  • Spines

    ...collection of software tools, developed and used by the Vertebrate Genome Biology Group at the Broad Institute. It provides basic data structures for efficient data manipulation (mostly genomic seque...

    2767 days ago

  • EXCAVATOR2tool

    EXCAVATOR2 is a collection of bash, R and Fortran scripts and codes that analyses Whole Exome Sequencing (WES) data to identify CNVs. EXCAVATOR2...of calling CNVs overlapping targeted exons from WES data and...

    2765 days ago

  • bipype

    Bipype is a very useful program, which prepare a lot of types of bioinformatics a...whole genome sequences) and metatranscriptomic data. If amplicons are input data, then bipype does reconstruct...ona program, which allows to show hierarchical data with...

    2764 days ago

  • Cutadapt

    Cutadapt finds and removes adapter sequences, primers, poly-A tails and other types of...racters. Also, paired-end reads and even colorspace data is supported. If you want, you can also just demultiplex your input data, wit...

    2751 days ago

  • fqtools

    fqtools is a software suite for fast processing of FASTQ files. Various...put file is specified, fqtools will attempt to read data from stdin. In this case, it is advisabe to specify the format of the data prov...

    2757 days ago

  • EAGER

    The automated reconstruction of genome sequences in ancient genome analysis is a multifaceted process. EAGER enc...ools for each step as well as new complementary tools tailored for ancient DNA data with...

    2754 days ago

  • Understanding Greedy Algorithms

    Learning greedy algo for biologist.  https://www.topcoder.com/community/data-science/data-science-tutorials/greedy-is-good/ This webpage is also useful for the same: http://learninglover.com/e...

    2753 days ago