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Standardized velvet assembly report
Requirements: velvet (velveth velvetg should be in your PATH) R (with Sweave) pdflatex (usually part of TeTeX)...Perl Optional: BLAT or BLAST (to generate alignments against a reference genome)...2746 days ago
2744 days ago
BIMA V3: an aligner customized for mate pair library sequencing
Summary: Mate pair library sequencing is an effective and economical method for detecting genomic structural varian...nfortunately, the mapping and alignment of mate pair read pairs to a reference genome...2741 days ago