Results for "MV data analysis"

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  • GeneBreak: a tool to systematically identify genes recurrently affected by the genomic location of chromosomal CNA-associated breaks by a genome-wide approach

    Development of cancer is driven by somatic alterations, including numerical and structural chromosomal aberration...ated breaks by a genome-wide approach, which can be applied to DNA copy number data obt...

    2181 days ago

  • MIRO : miRNA omics

    ...eline is a flexible and powerful tool for the analysis of miRNA (or more general...) expression using short-read deep sequencing data. In its present implementation MIRO is especially adapted for the analysis of reads generated with the I...

    2797 days ago

  • PHYMMBL

    ...eful prerequisite for genome assembly and for analysis of the biological diversi...new classification approach for metagenomics data which uses interpolated Markov mo...included in this distribution which combines analysis from both Phymm and BLAS...

    2792 days ago

  • Entrez Direct: E-utilities on the UNIX Command Line

    Entrez Direct (EDirect) is an advanced method for accessing the NCBI's suite of interconnected databases (publication, sequence,...t-driven function that simplifies the extraction of data fro...

    2783 days ago

  • Shinyheatmap

    Background: Transcriptomics, metabolomics, metagenomics, and other v...own for their production of large datasets. Visualizing such big data has posed technical challenge...depict high-dimensional numerical data as a colored grid of cells, e...visualization of extremely large datasets...

    2781 days ago

  • GenomeScope: open-source web tool to rapidly estimate the overall characteristics of a genome, including genome size, heterozygosity rate, and repeat content from unprocessed short reads

    ...studying genome evolution, and help to choose parameters for downstream analysis. We demonstrate its accuracy on 324 simulated and 16 real datasets with a wide range in genome s...

    2373 days ago

  • Beagle

    ...no effect in version 4.1. If your data contains nuclear families and...you use Beagle 4.1 in a published analysis, please report the progra...rate haplotype phasing and missing data inference for whole genome as...by-descent detection in population data. Genetics 194(2):459-71.doi:10.15...

    2774 days ago

  • IMPUTE2

    ...ready to try some example analyses on the test data that are provided with the do...l features of this website to prepare your own analysis: Learn about best... for imputation. Download reference data that you can use to impute g...

    2774 days ago

  • Graph Genome Suite

    Seven Bridges is the biomedical data analysis company accelerating breakthroughs in genomics research for cancer, drug development and precision medicine. We build self-improving systems...

    2774 days ago

  • eFORGE.v1.2

    The eFORGE tool provides a method to view the tissue specific regulatory component of a set of EWAS DMPs. eFORGE analysis takes a set of DMPs, such as...

    2774 days ago