Results for "Sequence analysis."
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FSA: Fast Statistical Alignment
FSA is a probabilistic multiple sequence alignment algorithm which use...omologous protein, RNA or DNA sequences. Much as distance-based phyl...This is made possible by the sequence annealing technique for const...such as aligning thousands of sequences or megabase-long sequences....2689 days ago
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
DnaSP is a software package for a comprehensive analysis of DNA polymorphism data. Version 5 implements a number of new features and analytical methods allowing extensiv...2689 days ago
- maftools - An R package to summarize, analyze and visualize MAF files. Introduction. With advances in Cancer Genomics, Mutation Annotation Format (MAF) is being widley...
2679 days ago
- ABACAS is intended to rapidly contiguate (align, order, orientate) , visualize and design primers to close gaps on shotgun assembled contigs based on a reference sequence....
2679 days ago
- BRIG is a free cross-platform (Windows/Mac/Unix) application that can display circula...es show similarity between a central reference sequence and other sequences as concentric rings. BRIG w...nabling genomic regions present in unassembled sequence...
2679 days ago
- GenomeComp is a tool for summarizing, parsing and visualizing the genome wide sequence comparison results derived from voluminou...pare, parsing and visualize large genomic sequences, especially closely related...ains. In addition, it can also show other sequence...
2678 days ago
- This sockeye software uses the Ensembl database project to import sequence and annotation information from...ionally import their own custom sequence and annotation data. Individu...s. Ensembl-derived and imported sequences can be analyzed by using a s...able to compactly display cross-sequence...
2678 days ago
DAGchainer: Computing Chains of Syntenic Genes in Complete Genomes
The DAGchainer software computes chains of syntenic genes found within complete genome sequences. As input, DAGchainer accepts a list of gene pairs with sequence homology along with their genome coordinates. Using a scoring functio...2678 days ago
- Collectively, the bedtools utilities are a swiss-army knife of tools for a wide-range of genomics analysis tasks. The most widely-used tools enable genome...
2671 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
...The first theme is large-scale RNA-Seq data analysis. Current cross-cohort RNA- an...ving the accuracy and efficiency of NGS data analysis. Customers can look forward to...for healthcare using genomics. By enhancing sequence-based diagnostics and clinical...2430 days ago
