Results for "NGS data analysis"
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Background. Next-generation sequencing technologies are now producing multiple times the genome size in total rea...ts implementation called RECORD. We evaluate RECORD on both simulated and real data. We...2770 days ago
- Spines is a collection of software tools, developed and used by the Vertebrate Genome Biology Group at the Broad Institute. It provides basic data structures for efficient data man...
2767 days ago
- EXCAVATOR2 is a collection of bash, R and...analyses Whole Exome Sequencing (WES) data to identify CNVs. EXCAVATOR2...ing targeted exons by integrating the analysis of In-targets and Off- ta...s overlapping targeted exons from WES data and enlarges the spectrum of dete...
2765 days ago
- Useful script for NGS analysis.
2765 days ago
- Bipype is a very useful program, which prepare a lot of types of bioinformatics a...whole genome sequences) and metatranscriptomic data. If amplicons are input data, then bipype does reconstruct...ona program, which allows to show hierarchical data wit...
2764 days ago
- Cutadapt finds and removes adapter sequences, primers, poly-A tails and other types of...racters. Also, paired-end reads and even colorspace data is supported. If you want, you can also just demultiplex your input data, wi...
2751 days ago
- fqtools is a software suite for fast processing of FASTQ files. Various...put file is specified, fqtools will attempt to read data from stdin. In this case, it is advisabe to specify the format of the data pro...
2757 days ago
- The automated reconstruction of genome sequences in ancient genome analysis is a multifaceted process...as new complementary tools tailored for ancient DNA data within a single integrated soluti...
2755 days ago
Understanding Greedy Algorithms
Learning greedy algo for biologist. https://www.topcoder.com/community/data-science/data-science-tutorials/greedy-is-good/ This webpage is also useful for the same: http://learninglover.com/...2753 days ago
- caffMatch is a novel scaffolding tool based on Maximum-Weight Matching able to produce high-quality scaffolds from NGS data (re...
2752 days ago
