2669 days ago
SeqMule: Automated human exome/genome variants detection
SeqMule takes single-end or paird-end FASTQ or BAM files, generates a script consisting of more than 10 popular ali...ing databases. SeqMule can be used for both Mendelian disease study and cancer genome...2668 days ago
2661 days ago
Pacbio Long Reads Compatible Software and Tools
The following software packages are known to be compatible with PacBio® data, in addition to PacBio's own SMRT&...lling RNA analysis Epigenetic base modifications and methylation Barcoding Genome...2660 days ago
gbtools: Interactive Visualization of Metagenome Bins in R
...t results from different methods can be compared side-by-side. gbtools reports summary statistics of bins i...ct bins with each other. Tool at https://github.com/kbseah/genome-bin-tools2649 days ago
2645 days ago
DeCoSTAR - Detection of Co-evolution
DeCoSTAR is a software which aims at reconstructing ancestral gene or genome organizations, in the form of sets of neighb...or the possibility to handle badly assembled genomes. DeCoSTAR is able to re...ion and fission events, as well as ancestral genome...2630 days ago
ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can int...odel can then be used to systematically annotate a genome in one or more cell types. By...n of each state. ChromHMM also produces files with genome-...2625 days ago
2625 days ago
Enrichr: a comprehensive gene set enrichment analysis
Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present a significant update to one of the tools in this domain called Enrichr. En...2617 days ago