Results for "AP"

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  • Prokka: tool for the rapid annotation of prokaryotic genomes

    Prokka is a software tool for the rapid annotation of prokaryotic genomes. A typical 4 Mbp genome can be fully annotated in less than 10 minutes on a quad-core computer, and scales...

    2680 days ago

  • PhenoGram

    ...red base-pair to base-pair regions, with or without other annotation. PhenoGram allows for annotation of chromosomal locations and/or regions with shapes in different colors, gene i...

    2679 days ago

  • sequenceserver

    SequenceServer lets you rapidly set up a BLAST+ server with an intuitive user interface for use locally or over the web. More at http://sequenceserver.com.

    2676 days ago

  • Pacbio Long Reads Compatible Software and Tools

    ...ment Consensus and variant calling RNA analysis Epigenetic base modifications and methylation Barcoding Genome Browsers Run QC Frameworks and APIs...

    2671 days ago

  • TMAP - torrent mapping alignment program General Notes

    TMAP - torrent mapping alignment program General Notes TMAP is a fast and accurate alignment software f...sequencing technologies. The latest TMAP is unsupported. To use a supp...git clone git://github.com/iontorrent/TMAP.git cd TMAP git submodule...

    2653 days ago

  • NGS teaching material

    High throughput sequencing (HTS) technologies are being applied to a wide range of important topics in bio...aining module, HTS bioinformatics training, and lecturing/seminars of HTS approaches specifically targetin...

    2650 days ago

  • LoRDEC: a hybrid error correction program for long, PacBio reads

    ...ess large read data sets, included from eukaryotic or vertebrate species, on a usual computing server, and even works on desktop/laptop computers. It adopts a novel graph based approach: it builds a...

    2645 days ago

  • WGS Celera Assembler version 8.3rc2

    ...bsp; []-rwxrwxr-x 1 urbe urbe  11K Apr 10 11:41 addCNSToStore-rwxrwxr-x 1 urbe urbe 575K Apr 10 11:41 addReadsToUnitigs-r...o-v2.pl-rwxrwxr-x 1 urbe urbe  48K Apr 10 11:41 convertOverlap-rwxr...reBuild-rwxrwxr-x 1 urbe urbe  33K Apr 10 11:41 overlapStoreIndexer...

    2645 days ago

  • Lifemap

    Lifemap is an interactive tool to explore the WHOLE NCBI TAXONOMY. The concept used in Lifemap is similar to the one used in cartography with tools like Google Maps...777 Bacteria and 705,847 Eukaryotes. The Lifemap tree is updated every two wee...

    2645 days ago

  • UpSetR Shiny App!

    ..."File" takes a correctly formatted.csv file. "List" takes up to 6 different lists that contain unique elements, similar to that used in the web applications BioVenn (Hulse...

    2641 days ago