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This project contains scripts and tutorials on how to assemble individual microbial genomes from metagenomes, as described in: Genome sequences of rare, uncultured bacteria obtaine...2666 days ago
- ...programs for interacting with high-throughput sequencing data. It consists of three separate repositories: SamtoolsReading/writing/editing/indexing/viewing SAM/BAM/CRAM formatBCFto...
2665 days ago
Pacbio Long Reads Compatible Software and Tools
...dition to PacBio's own SMRT® Analysis suite. All packages are believed to be open source or freely available for non-commercial use. See the individual project sites for up-to-d...2665 days ago
- ...te or KronaTools, which includes support for several bioinformatics tools and raw data formats. The interactive charts are self-contained and can be viewed with any modern web brows...
2658 days ago
gbtools: Interactive Visualization of Metagenome Bins in R
We have developed gbtools, a software package that allows users to visualize metagenomic assemblies by plotting coverage (sequencing depth) and GC values of contigs, and also to ann...2654 days ago
- ...intended as a tool to help researchers dealing with non-model organisms acquire and process transcriptomic high-throughput sequencing data without having to learn extensive bioinfor...
2647 days ago
- ...An ordered list of values. In most languages, this is realized as an array, vector, list, or sequence. These are universal data structures. Virtually all modern programming...
2645 days ago
- ...TS) technologies are being applied to a wide range of important topics in biology. However, the analyses of non-model organisms, for which little previous sequence information is av...
2644 days ago
WGS Celera Assembler version 8.3rc2
...n 8.3rc2, which was released on May 24, 2015.This distribution package provides a stable, tested, document...ady for installation.The source code package includes full source code (revision 4627), Makefiles, and scr...2639 days ago
- UpSetR generates static UpSet plots. The UpSet technique visualizes set intersections in a matrix layout and introduces aggregates based on groupings and queries. The matrix la...
2635 days ago
