SATSUMA : Highly sensitive whole-genome synteny alignments.
Satsuma is a whole-genome synteny alignment program. It takes two genomes, computes alig...uma. Bioinformatics, 26(9), 1145-51. Tutorial at http://evomics.org/learning/genomics/satsuma/2942 days ago
RCircos: an R package for Circos 2D track plots
RCircos package provides a simple and flexible way to make Circos 2D track plots with R and could be easily integrat...2935 days ago
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CovCal: Coverage / Read Count Calculator
Coverage / Read Count Calculator Calculate how much sequencing you need to hit a target depth of coverage (or vice versa). Instructions: set the read length/configurat...2194 days ago
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Comparative genomics educational material and papers bookmarks
Alignment of the porcine genome against seven other mammalian genomes (Supplementary Information) identified homologous synteny blocks (HSBs). Using porcine HSBs and str...2761 days ago
Method in Comparative genomics !!
We present methods for the automatic determination of genome correspondence. The algorit...function for novel motifs. Our results demonstrate the power of comparative genomics to further our understanding...2761 days ago
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