Results for "species"
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...uman gut samples formed 1,634 genome bins (>200kb) in 3 hours, where 621 genome bins are >50% complete with <5% contamination from other species. Further analysis shows that...2644 days ago
- ...the rearrangements, insertions or deletions of genome segments between species or strains.It can be easily u...ge genomic sequences, especially closely related genomes such as inter-species or inter-strains. In addition...
2661 days ago
- This sockeye software uses the Ensembl database project to import sequence and annotation information from several eukaryotic species. A user can additionally import their own cu...
2661 days ago
- ...tion is to use this tool to survey the genetic diversity of endangered species as the identified sequence differences can be used to design genotyping arrays to assist in the species' management. http://www.bx.p...
2649 days ago
- ...s the specific strengths and weaknesses of alternative HTS technologies, the computational resources needed for HTS, and how to analyze non-model species using HTS. The course consist...
2614 days ago
LoRDEC: a hybrid error correction program for long, PacBio reads
...gs of an assembly, etc. Why is LoRDEC different? It is efficient and can process large read data sets, included from eukaryotic or vertebrate species, on a usual computing server,...2609 days ago
- ...nning. The current tree contains ALL species present in NCBI taxonomy as of October 18th, 2016: 1,135,169 species including 10,545 Archaea, 418...re is one) The rank (kingdom, family, class, species...) Ability to go to the cor...
2609 days ago
- ...igh quality assemblies of bacterial sequence data. The bacterial sample used in this tutorial will be referred to simply as “Species” since it is live...
2584 days ago
CAR: Reconstructing Contiguous Regions of an Ancestral Genome
We describe a new method for predicting the ancestral order and orientation of those intervals from their observed adjacencies in modern species. We combine the results from this me...2571 days ago
Synteny Portal: a web-based application portal for synteny block analysis
...rtal for constructing, visualizing and browsing synteny blocks. With Synteny Portal, users can easily (i) construct synteny blocks among multiple species by using prebuilt alignments...2565 days ago
