Genomicus: genome browser that enables users to navigate in genomes in several dimensions
Genomicus is a genome browser that enables users to navigate in genomes in several dimensions: linearly along chromosome axes, transversaly...rthologous and paralogous copies in all the other sequenced metazoan genomes. Moreo...2416 days ago
2415 days ago
2415 days ago
Taxoblast : Taxoblast is a pipeline to identify contamination in genomic sequence
Modern genome sequencing strategies are highly sensitive to contamination making the detection of foreign DNA seq...for the post-assembly detection of contaminating sequences in the published genome of the...2412 days ago
coursera genome assembly tutorial
Solutions to Coursera Genome Sequencing (Bioinformatics II)2410 days ago
miniasm: very fast OLC-based de novo assembler for noisy long reads
Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It...it takes about 3 minutes to assemble a bacterial genome. Under the default setting, m...onfirms that at least for high-coverage bacterial genomes, it is...2408 days ago
Opera: An optimal genome scaffolding program
Opera (Optimal Paired-End Read Assembler) is a sequence assembly program (http://en.wi...th features for the assembly of large and complex genomes.Song Gao, Denis Bertrand, Bu...xact scaffolding of large, repeat-rich eukaryotic genomes with p...2407 days ago
Oxford Nanopore Sequencing, Hybrid Error Correction, and de novo Assembly of a Eukaryotic Genome
Monitoring the progress of DNA molecules through a membrane pore has been postulated a...ble that we used for sequencing the S. cerevisiae genome. To make use of these data, w...re complete representation of the features of the genome and cor...2406 days ago
Computational Genomics: Applied Comparative Genomics
The primary goal of the course is for students to be grounded in theory and leave the...antitative approaches for comparing and analyzing genomes starting from raw sequencing...across the tree of life. The topics will include genome assembl...2406 days ago
2406 days ago